Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00822 ATGGGGTTTGCCGGTAATGTAGAGCCGTGTTTCATCGTTCCTAGTGTAGTTGCAGTTAATGAATCGTTCTTAAACCAATCGAGAAACTCGTCGAAAGCTAACTGGCTTGCGCAGCATAATGCTGGTGTAATGGCAGATCTTGATTTCTTTATTGGAGATGAGGCGCTTGCGAAGTCGAGATCTAGTAGTACTTATAATCTTAGTTATCCGATTCGAAATGGTCAGGTTTATAATTGGGATGCCATGGAGCGGTTCTGGCAGCAGTGTATATTCAATTATTTACGGTGTGATCCGGAGGATCATTATTTTCTTTTGACCGAGAGCCCTCTTACGGCGCCTGAGAGTCGAGAGTATACGGGTGAAATAATGTTCGAGACATTCAATGTTCCGGGGCTTTACATTGCTGTCAATTCCGTCCTTGCTCTTGCTGCTGGTTATACTACATCTAAGTGTGAGATGACAGGAGTTGTAGTGGACGTTGGAGATGGGTCTACTCATGTTGTGCCTGTTGCAGATGGCTATGTTATTGGAAGTAGCATTAAGTCAGTTCCCATTGCTGGCAAAGACGTGACTCTCTTTGTCCAACAGCTCATGAAGGAAAGAGGAGAAAATGTACCACCTGAGGACTCTTTTGAAGTGGCCCGAAAAGTGAAGGAAATGTATTGCTATACCTGTTCTGACATTGTCAAGGAGTTCAATAAGCATGATAAGGAGCCAGGCAAGTATCTAAAGCACTGGAAGGGTATTAAACCCAAGACTGGCGCACCATATTCTTGTGATATTGGCTATGAACGATTTCTTGGCCCGGAGGTGTTCTTCAATCCTGAAATTTATAGCAGCGAGTTTACCACCCCTTTGCCTGCTGTAATAGACAGGTGTATTCAATCTGCTCCAATTGATACCAGAAGAGCGTTGTACAAGAATATAGTACTATCTGGAGGTTCAACAATGTTCAAGGACTTCCATAGGAGGTTACAAAGAGACTTGAAGAAAATCGTGGATGCTCGAATCCTTGCTTCTGAAGCTAGATTAGGAGGAGAAATAAAAGCGCATCCAGTGGAAGTCAATGTTGTTAGCCATCCCATCCAGAGATTTGCCGTCTGGTTTGGAGGCTCCGTTCTTGCATCAACTCCCGAGTTTTTTGCGGTGTGTATGCTATACCTTTTTCATATGCCAATTAAAATCGTTTTTGGGAAGGTGTCAACCATGGTACCTGTTAGGCTTGTCATACAAAAGCGGAATATGAGGAGTACGGTGCAAGCATATGCCGTACGAATCCTGTTTTCAAAGGAATATGCTTTGCCGTTTCCCCTTGAGCGTGCACCTCGGTTCGATGCTATTCTTGCAGCCTTTCCTTTGGCAGGTGTACATGGGTGA 1377 44.15 MGFAGNVEPCFIVPSVVAVNESFLNQSRNSSKANWLAQHNAGVMADLDFFIGDEALAKSRSSSTYNLSYPIRNGQVYNWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGSTHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMKERGENVPPEDSFEVARKVKEMYCYTCSDIVKEFNKHDKEPGKYLKHWKGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSEFTTPLPAVIDRCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARILASEARLGGEIKAHPVEVNVVSHPIQRFAVWFGGSVLASTPEFFAVCMLYLFHMPIKIVFGKVSTMVPVRLVIQKRNMRSTVQAYAVRILFSKEYALPFPLERAPRFDAILAAFPLAGVHG* 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14179138 14183769 - Chy10G180160.1 Chy10g00822 235197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00822 458 SUPERFAMILY Actin-like ATPase domain 153 384 IPR043129 -
Chy10g00822 458 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 1 385 - -
Chy10g00822 458 SMART actin_3 2 390 IPR004000 -
Chy10g00822 458 Pfam Actin 1 384 IPR004000 -
Chy10g00822 458 Gene3D Actin; Chain A, domain 4 185 283 - -
Chy10g00822 458 SUPERFAMILY Actin-like ATPase domain 1 157 IPR043129 -
Chy10g00822 458 PANTHER ACTIN 1 385 IPR004000 -
Chy10g00822 458 CDD NBD_sugar-kinase_HSP70_actin 68 186 - -
Chy10g00822 458 Gene3D - 138 366 - -
Chy10g00822 458 Gene3D - 1 385 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy09g00409 Chy10g00822 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00822 Chy-Chr10:14179138 Chy10g00547 Chy-Chr10:12097906 7.90E-63 transposed
Chy10g00822 Chy-Chr10:14179138 Chy11g00060 Chy-Chr11:639147 5.57E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00822 K18584 - csv:101205075 779.63