Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00833 ATGAAGTTAAATGTGATTGTTCATCATCCTCCAACCCCACCAAAGCTTCCTCTCTTAGGTCATCTACATTTGGTCACCTCTCTCCCTCATCGTTCTTTTCGTCACCTTTCAAGAAAATACGGTCCCGTCATGCTCCTCAAACTCGGCTCTATCCCGACCGTTGTAGTCTCCTCCGCCACTGCTGCAAAAGAGGTGTTAAAAGTTCACGACCTTGCTTCATGCAGCCGCCCGCGCTCGATTGCTAATGCAAGATTTTCATACAACTATCTAGACATTGGGTTTGCTCCGTATGGCAATCATTGGAGGGAAGTTCGAAAGATTAGTGTTCTTGAGCTCTTCAGCGCAAGACGAGTGCAATCGTTTCAAAAGATAAGAGAAGAAGAGATTGGTGTGATGTTAAACTCCATTTCTCAATCTTCATTATTATCTAATGATCCAGTTGATTTGAGTGAGAAATTTTACTCACTCACTGCAAATATGATAACTCGGATTGCTTTTGGGAAGAAGTTTAGAGGGGGTGAGTTAGATAATGAGAATTTTCAGATGGTTATTAAAAGAGCAATGGCAGCAGTGGGAAGCTTTTCAGCAGCTGATTATCTTCCTAGAGTGGGTTGGATTATTGATTGGGTTAGTGGTGTTCATAGCAGATTGGAGACGAGTTTTAATGAGTTGGATGCTTTTTTTCAACATATAGTGGATGATCGTATCAACTTTAGGGAGAGTTGTTCGTCTCATAATAACAATGGTGATGGATATGATCAAGAAAACATTGTCGATGTTTTGTTGAAAATGGAGAAGAATAGCTCTCAATATGGTGAAGTGAAACTCACTCGAGATTGCATCAAAGCACTCATCATGGATATATTTCTTGCTGGAGTGGAAACTGGAGCAAGCACGCTTGTTTGGACAATGACAGAGTTGATAAAAAATCCAAAGGTAATGAAAAAGCTACAAAATGAGATCAGAAATTGTGTAAAAGAAAATAAAATGGTAAAAGAGAGTGACCTTCAGAACCTTGAATATCTAAAAGCAGTGGTGAAGGAAGTGCTAAGGTTACATACACCAGCTCCACTTCTCCTTCCAAGAGAAACCATGTCTCATTTTAAGCTAAATGGTTATGATATTCTCCCTAAAACTCACATTCATGTCAACGTGTGGGCAATCGGACGAGACCCGGAAATATGGAAAAACCCAGAAGAGTTCATACCAGAGAGATTTATAGGAAGTAATATTGATTACAAAGGACAAAATTTCGAGTTATTGCCGTTTGGATCGGGTCGGAGAATTTGCCCTGGAATGAATATGGCAAGCTTTACAGTGGAGCTAGCATTGGCTAATGTATTGTTGTGCTTTGATTGGAAATTACCACATGGAATGAAAGAAGAAGATGTGGATATGGAAGAGGAAACTGGTCTTGCTGTTGCTAAGAAATCTCCTCTTCAACTTGTTCCTGTCCATTACTTCAACTCCAAAGCATAG 1479 40.03 MKLNVIVHHPPTPPKLPLLGHLHLVTSLPHRSFRHLSRKYGPVMLLKLGSIPTVVVSSATAAKEVLKVHDLASCSRPRSIANARFSYNYLDIGFAPYGNHWREVRKISVLELFSARRVQSFQKIREEEIGVMLNSISQSSLLSNDPVDLSEKFYSLTANMITRIAFGKKFRGGELDNENFQMVIKRAMAAVGSFSAADYLPRVGWIIDWVSGVHSRLETSFNELDAFFQHIVDDRINFRESCSSHNNNGDGYDQENIVDVLLKMEKNSSQYGEVKLTRDCIKALIMDIFLAGVETGASTLVWTMTELIKNPKVMKKLQNEIRNCVKENKMVKESDLQNLEYLKAVVKEVLRLHTPAPLLLPRETMSHFKLNGYDILPKTHIHVNVWAIGRDPEIWKNPEEFIPERFIGSNIDYKGQNFELLPFGSGRRICPGMNMASFTVELALANVLLCFDWKLPHGMKEEDVDMEEETGLAVAKKSPLQLVPVHYFNSKA* 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14269029 14270787 + Chy10G180270.1 Chy10g00833 235208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00833 492 Pfam Cytochrome P450 10 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 Gene3D Cytochrome P450 7 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 SUPERFAMILY Cytochrome P450 10 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Chy10g00833 492 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 156 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00833 492 PANTHER CYTOCHROME P450 71B11-RELATED 8 487 - -
Chy10g00833 492 PANTHER CYTOCHROME P450 71B16-RELATED 8 487 - -
Chy10g00833 492 Coils Coil 314 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00833 Chy-Chr10:14269029 Chy10g00836 Chy-Chr10:14284128 0 dispersed
Chy10g00838 Chy-Chr10:14297724 Chy10g00833 Chy-Chr10:14269029 2.02E-32 dispersed
Chy10g00841 Chy-Chr10:14324803 Chy10g00833 Chy-Chr10:14269029 1.57E-56 dispersed
Chy10g00833 Chy-Chr10:14269029 Chy10g00834 Chy-Chr10:14271100 1.37E-78 tandem
Chy04g01675 Chy-Chr4:23132994 Chy10g00833 Chy-Chr10:14269029 1.02E-99 transposed
Chy10g00833 Chy-Chr10:14269029 Chy12g01213 Chy-Chr12:16884510 1.62E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00833 - - csv:101216707 922.154