Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00834 ATGACGATGAATAGCATTCTCATATGGTGTCCTCTCCTCTTTCTCTTAACTTCTCTACTTCTTCTCCAAACAAAAAAGCTTATTCACAGCAACAACAAGAAGCTTATTACTAATTCTCCTCCAAGCCCTCCAAAGCTTCCTTTATTGGGTCATTTACACCTCCTTGGCTCCCACCCTCATCGCTCTTTATGCAACCTTTCACGAACACACGGTCCCATCATGCTTCTGAAACTCGGCTCCATTCCGACCGTCGTCATCTCTTCCGCAACAGCCGCGAGAGAACTATTGAAACACCACGATCTCGCATCTTGCAGCCGCCCTCGCTTAATGGGAAGTGGAAGATTTTCCTACAACTTTCAAGACCTGAATTTGTCTCCATATGGCGAGCGTTGGAAAGAGCTTCGAAAAATTTTCATACTCGAGCTCTTTAGCACTAAACGAGTGCAATCATTTCATCATATTAGAGAAGAGGAAGTGAATTTGCTCATAAACTCAATATCTCAACAATGCTTAAACTTTTCTTCAAATCCAATTGATTTGAGTGACAAAAGCTATTCTCTTACTGCCAATATTACAACAAGAATTGCTTTTGGGAAGAGCTTTAGAGGGGGTGAATTAGATAACCAAAATTTTAAAAAGCTTATGCGTGGAGCAATTGACGCCCTGAAAAGCTTCTGGATTACCGATTTCTTTCCGAGTTTCGGTTGGATTGTTGACCGAATCAGTGGTGTTCATGGGAAGTTGGAGAAGAGCTTTGTCAAAGAAGGAGGGCCCTTTTCCAATCATCCTCGTTCCGAACTTTGTGGAAGTCTGAAAATGTCTCTTCTTCCACTCATCTTGCTATCCACTCTGCTTCTGTTGATCATCATCCTAAAACGGAAGAAAAATAGATATAGAAAAGAGGGAAATTTTCCTCCAAGTCCACCAAAGCTACCAATCATAGGAAACTTGCACCAACTTGGCAAGCTCCCACACCAATCTCTATGGCGTCTCTCTCAGCTTTATGGCCCCATCATAAGTCTCAACCTCGGCAGTATTCAAACCACCGTCATCTCCTCCGCCGATGCTGCCCGTGGCCTCTTCAAAACACACGACCTTCAAACCTGCAGTCGGCCACAAACCCAAGGTGCCAGAAAACTCACTCACAACTTCCATGACATTGGGTTTTCCCCGTATGGTGATTACTGGCGAGAGATGAGAAAGGTTTGCGTTCTTGAGCTTTTTAGTCTCAAGAGAATAAAATCTTGCCAACCCATTATAGAACAAGAAATGAATTCGCTTATCGAATCGATTTCGGAATCGGCTTCTTGTGGGGATGTTGTTGATCTTAGTGACAAGTCCATGGCTTTCACAGCTGCTATTATCTTTAGGATAGCTTTTGGGAAGAAGGTTTGTAAAGGAGATGGATTTCATGAGGTTGTGAATGAAGCTGAGGCTTTGTTGGGAAGTTATAGTGCATCTGAATTGTTTCCTAATTTTGTGGGTAAACCTATTGATTGGTTTAATGGATATCAGAAAAGGCTTAACAAGGTTTACAATGAGTTGAGCGGTTTGTTTCAAGAAGTGATTGATGAACATCTTTGTGTTGGGAGAGATCAAGAAGCTAAGGAAGATGATATTATTGATGTGCTTTTGGGACTAAGCAACCAGCAAGATCAATCTGCTTCTTTCAATGTTTCCATTACTCATGACCATATCAAAGGCATTCTTTTGATTGTATTATTGGATATGCATGAACAGAACATATTTTTGGGAGGATTAGACACAAGTTCCATAACAATAGTATGGGCAATGGCAGAACTTACAAAGAAACCAAAACTAATGAAGAAAGCTCAACAAGAAATCAGAAGTCACATGAAAAACAGAGGAAACATAACAGACAAAGAAATCGAACAGTTTCAATATCTAAAAATGATAGTGAAAGAGACACTAAGAATGCATCCACCAGCACCCCTTCTTCTTCCAAGACAAGTCATGTCCCATTTCAAAATGGAAGGCTTCGATTTTTACCCGAAGACGATGGTTCAAATCAACGCTTGGGCAATTGGAAGAGACCCCAAATGCTGGAAAGACCCCGACGAATTCATGCCAGAGAGATTTGCAGAGAGCTGCATTGATTTCAGAGGACAGCATTTCGAGTTCCTGCCGTTCGGGGCCGGGCGGAGGATTTGTCCAGCAATGAATTTGGGGATCAAGAATGTGGAGGTTGCTTTGGCAAATCTTTTGTATCATTTTGATTGGAAGTTGCCGGAAGGAATGAAGGAAGAGGATTTGGATATGGAAGAGAGTACGGGGTTTAGTCTCACTATTTACAAGAAGTTGCCTCTTAAACTTGTCCCTGTTCCATACATTCCATGA 2358 41.77 MTMNSILIWCPLLFLLTSLLLLQTKKLIHSNNKKLITNSPPSPPKLPLLGHLHLLGSHPHRSLCNLSRTHGPIMLLKLGSIPTVVISSATAARELLKHHDLASCSRPRLMGSGRFSYNFQDLNLSPYGERWKELRKIFILELFSTKRVQSFHHIREEEVNLLINSISQQCLNFSSNPIDLSDKSYSLTANITTRIAFGKSFRGGELDNQNFKKLMRGAIDALKSFWITDFFPSFGWIVDRISGVHGKLEKSFVKEGGPFSNHPRSELCGSLKMSLLPLILLSTLLLLIIILKRKKNRYRKEGNFPPSPPKLPIIGNLHQLGKLPHQSLWRLSQLYGPIISLNLGSIQTTVISSADAARGLFKTHDLQTCSRPQTQGARKLTHNFHDIGFSPYGDYWREMRKVCVLELFSLKRIKSCQPIIEQEMNSLIESISESASCGDVVDLSDKSMAFTAAIIFRIAFGKKVCKGDGFHEVVNEAEALLGSYSASELFPNFVGKPIDWFNGYQKRLNKVYNELSGLFQEVIDEHLCVGRDQEAKEDDIIDVLLGLSNQQDQSASFNVSITHDHIKGILLIVLLDMHEQNIFLGGLDTSSITIVWAMAELTKKPKLMKKAQQEIRSHMKNRGNITDKEIEQFQYLKMIVKETLRMHPPAPLLLPRQVMSHFKMEGFDFYPKTMVQINAWAIGRDPKCWKDPDEFMPERFAESCIDFRGQHFEFLPFGAGRRICPAMNLGIKNVEVALANLLYHFDWKLPEGMKEEDLDMEESTGFSLTIYKKLPLKLVPVPYIP* 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14271100 14278653 - Chy10G180280.1 Chy10g00834 235209

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00834 785 Coils Coil 608 628 - -
Chy10g00834 785 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 717 726 IPR017972 GO:0005506|GO:0016705
Chy10g00834 785 PRINTS E-class P450 group I signature 724 747 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 714 724 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 450 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 332 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 637 655 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 678 702 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 594 620 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS E-class P450 group I signature 574 591 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 Pfam Cytochrome P450 40 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 Pfam Cytochrome P450 305 769 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 Gene3D Cytochrome P450 32 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS P450 superfamily signature 585 602 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS P450 superfamily signature 715 724 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PRINTS P450 superfamily signature 638 649 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 Gene3D Cytochrome P450 288 775 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PANTHER CYTOCHROME P450 71B16-RELATED 280 782 - -
Chy10g00834 785 PANTHER CYTOCHROME P450 71B11-RELATED 5 254 - -
Chy10g00834 785 SUPERFAMILY Cytochrome P450 40 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 SUPERFAMILY Cytochrome P450 297 780 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00834 785 PANTHER CYTOCHROME P450 71B11-RELATED 280 782 - -
Chy10g00834 785 PANTHER CYTOCHROME P450 71B16-RELATED 5 254 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00834 - - K01773 csv:101216461 944.11
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00834 Chy-Chr10:14271100 Chy10g00836 Chy-Chr10:14284128 1.20E-90 dispersed
Chy10g00833 Chy-Chr10:14269029 Chy10g00834 Chy-Chr10:14271100 1.37E-78 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g615 . . . . . . . . . . . Cma18g00746 . . . . . Bhi07g01816 . . . . . . Cla05g02610 . . . . . . . . . . Lsi04g00624 Csa05g02271 Chy10g00834 Cme10g00597 . . . . . . . . . . . Cma04g01782 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000114 2 12 3 1 0 7 0 7 6 6 11 9 15 7 3 22 9 4 0 10 11 2 0 8 13 10 6 17 8 7 216
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy10g00834 Chy_Chr10 FPKM 79.666664 89.239731 92.772865 91.395119 56.485104 53.817043 49.777412 18.918554 18.026705 15.361135