Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00837 ATGCTCCTCAAATTTGGCTCCGTTCCGACCGTCATCATTTCTTCTGCAAGGATTTCAAAAGAGTTGTTCAAACACCATGACCTTGCTTCTTGTAGCCGCCCTCGCTTAGCGGCCACTGCAAAATATTCATACAACTTCTTAGACTTGATTTTTTCCTCTTACGACGATCACTGGAGGGAGCTTCGTAAGATTTACATCGCTGAGCTCTTTAGTCCCAAACGTGTGCAATCTTTTCAACATATTAGAGAAGAGGAAGTGCATCAACTTGTGATTTCCATCTCTCAATCCTCATCTTCTTCAACTCTATTTGATTTTACAACAAAATCGTATTCTCTCACGTCTAATATCATTACTAGGATTGCGTTTGGAAAGAGTATTAGAGGGAGTGAAAGTGAACTAGATGATGGTAATGTTGAGGGGGTTATACAAAGAGCAAGTGCGGCGATCGGAAGCTTCTCGACAAGTGATTTCTTTCCTAGTTTCGGATGGATTATTGATCGGCTCACAGGTGTTCATGGGCGGCTCGAGAAAAACTTTAAGGAGTTGGATGCTTTTTTAGAACATGTAATTGAGGATCGTATTAACTTATGGGCAGCTTGTCAAAAAGAAGAAAACATTCTTGATGTTTTGTTGAGAAGGGAGAGAGATTGCTATGAATTTGGTTCAATCAAATTCACTCGAGATTGCATCAAGGCAGTTGTCATGGATTTGTTTCTAGCTGGAGTAGAAACAGGAGCAAACACACTTGTTTGGACAATGTCAGAGCTAGTTAGAAATTCGAAAGTAATGAAGAAGCTGCAACATGAAATCAGAAGCACCATAATTGGGCAAGATCAAGTGAAGGAGAACGAGCTCGAAAAGCTTCAGTATCTAAAAATGGTGGTGAAAGAGGCTTTAAGGCTTCATCCACCCGTCCCACTTTTGCTTCCAAGAGAAACCATTTCTCATTTTAAACTCAATGGTTACGATATCGATCCAAAAACTCGTATTCATGTGAATGCATTCGCAATTGGAAGAGACACCGATTCTTGGAAAAACCCAGAAGAGTTTTGTCCAGAGAGGTTTATGGAAAGTAATATTGATTACAAAGGACAAAACTTTGAGTTAATTCCATTTGGAGCTGGTAGAAGAGTATGTCCCGGTGTGAATATGGGGATTATAGCAGTAGAGTTGGCATTGGCTAATATGTTATTGTGTTTTGATTGGAAATTACCAAATGGAATGAAAGGAGAAGATTTAGACATGGAAGAGGAATTTGAGCTTTCTGGAAGTGGACCCGCTGCTTGCATTGGGAACAAGTAA 1302 40.02 MLLKFGSVPTVIISSARISKELFKHHDLASCSRPRLAATAKYSYNFLDLIFSSYDDHWRELRKIYIAELFSPKRVQSFQHIREEEVHQLVISISQSSSSSTLFDFTTKSYSLTSNIITRIAFGKSIRGSESELDDGNVEGVIQRASAAIGSFSTSDFFPSFGWIIDRLTGVHGRLEKNFKELDAFLEHVIEDRINLWAACQKEENILDVLLRRERDCYEFGSIKFTRDCIKAVVMDLFLAGVETGANTLVWTMSELVRNSKVMKKLQHEIRSTIIGQDQVKENELEKLQYLKMVVKEALRLHPPVPLLLPRETISHFKLNGYDIDPKTRIHVNAFAIGRDTDSWKNPEEFCPERFMESNIDYKGQNFELIPFGAGRRVCPGVNMGIIAVELALANMLLCFDWKLPNGMKGEDLDMEEEFELSGSGPAACIGNK* 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14288655 14291420 - Chy10G180310.1 Chy10g00837 235212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00837 433 PANTHER CYTOCHROME P450 71B11-RELATED 1 421 - -
Chy10g00837 433 Gene3D Cytochrome P450 1 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 Pfam Cytochrome P450 3 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS P450 superfamily signature 240 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PANTHER CYTOCHROME P450 71B16-RELATED 1 421 - -
Chy10g00837 433 PRINTS E-class P450 group I signature 333 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 292 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 229 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 PRINTS E-class P450 group I signature 249 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00837 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Chy10g00837 433 SUPERFAMILY Cytochrome P450 2 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00837 Chy-Chr10:14288655 Chy10g00840 Chy-Chr10:14318939 0 dispersed
Chy10g00836 Chy-Chr10:14284128 Chy10g00837 Chy-Chr10:14288655 0 tandem
Chy10g00837 Chy-Chr10:14288655 Chy10g00838 Chy-Chr10:14297724 9.43E-25 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00837 - - csv:101203858 769.615