Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00840 ATGATGACGAATAGCATTTTCATATGGTTTCCTCTCCTCTTTCTCTTAACTTCTCTACTTCTTCTCAAAACAAAAAAGCTTATTCACAGCAACAACAAGAAGCTTATTACTAATCCTCCTCCAAGCCCTCCGAAGCTTCCTTTCTTGGGTCATTTACACCTCCTTGGCTCCCACCCTCATCGATCATTATGCAACCTTTCACTAACCCACGGTCCCATCATGCTCCTGAAACTCGGCTCCATCCCAACTGTCATCATCTCTTCCGCAACAGCCGCGAGAGAGCTATTCAAACACCACGATCTCGCATCTTGCAGCCGCCCTCGCTTAACGGGAAGTGGAAGATTTTCCTACAACTTTCAAGACCTGAATTTATCGCCATATGGCGTGCGTTGGAGAGAGCTTCGAAAGATTTTCATGCTCGAGCTCTTTAGTACTAATCGAGTGCAATCATTTCATCATATTAGAGAAGAGGAAGTGAGTTTGCTCATAAACTCAATCTCTCAACAATCCATAAACTTTCCTTCAAATCCAATTGATTTGAGTGACAAAAGCTATTCTCTTGCTGCCAATATCATAACAAGAATTGGTTTTGGGAAGAGCTTTAGAGGGGGTGAATTAGATAACCAAAATTTTAAAAAGGTTATGCGTAGAACAACTGATGCCCTTAAAAGCTTCTGGATTACCGATTTCTTTCCGAGTTTCGGTTGGTTTGTTGACCGAATCAGTGGTGTTCATGGGAAGTTGGAGAAGAGCTTTGGTGAGATGGATGCTTTTTTTCAAAAGGTAGTTGATGATCGTATGAACATCGACAAGGCAACTTCTGGAAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGAAGAGAGACGGCTTTCAATCTGATGCACTCATCCTTACACAAGATTCCATTAAAGCACTAATCATGGATATCTTTCTAGCAGGAGTAGAAACAAGTGCAAACACCATTGTTTGGGCAATGACAGAGCTAATTAGAAACTCAAGAGTAATGAAAAAGCTACAAGACCATATCAGAAGTCACATAAAAGAAGATCGAGTAAAAGAAATCGACCTTGAAAAGCTTCCATATCTGAAAATGGTAGTGAAAGAGGTTTTAAGGTTGCATCCACCAGCTCCACTTCTACTACCGAGAGAAACCATTTCCCATTTTAAGCTCAATGGTTATGATATACCTCCCAATGCTCATCTTCATGTCAATGTTTGGGCCATTGGGCGAGATCCAGAGAGTTGGGTTAATCCTGAAGAGTTTTTTCCAGAAAGGTTTATGGAAAGTAATATTAATTATATAGGACAGAATTATGAGTTATTACCTTTTGGAGGTGGTAGAAGAGTTTGTCTTGGAATGAATATGGGAATCTTTACAATAGAGTTGACATTGGCTAATTTGTTACTATGTTTTGATTGGAAATTGGGAGATGGAATGAAAGAAGAAGGTGTCGATATGGAAGAGGATTTTGGTCTTGCTATTGCCAAAAAATCACCTCTTAAACTTGTTCCCATCCCTTAG 1527 39.69 MMTNSIFIWFPLLFLLTSLLLLKTKKLIHSNNKKLITNPPPSPPKLPFLGHLHLLGSHPHRSLCNLSLTHGPIMLLKLGSIPTVIISSATAARELFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGVRWRELRKIFMLELFSTNRVQSFHHIREEEVSLLINSISQQSINFPSNPIDLSDKSYSLAANIITRIGFGKSFRGGELDNQNFKKVMRRTTDALKSFWITDFFPSFGWFVDRISGVHGKLEKSFGEMDAFFQKVVDDRMNIDKATSGNEENIVDVLLRMKRDGFQSDALILTQDSIKALIMDIFLAGVETSANTIVWAMTELIRNSRVMKKLQDHIRSHIKEDRVKEIDLEKLPYLKMVVKEVLRLHPPAPLLLPRETISHFKLNGYDIPPNAHLHVNVWAIGRDPESWVNPEEFFPERFMESNINYIGQNYELLPFGGGRRVCLGMNMGIFTIELTLANLLLCFDWKLGDGMKEEGVDMEEDFGLAIAKKSPLKLVPIP* 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14318939 14321262 + Chy10G180340.1 Chy10g00840 235215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00840 508 Gene3D Cytochrome P450 32 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PANTHER CYTOCHROME P450 71B11-RELATED 5 507 - -
Chy10g00840 508 SUPERFAMILY Cytochrome P450 40 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 Pfam Cytochrome P450 40 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PANTHER CYTOCHROME P450 71B16-RELATED 5 507 - -
Chy10g00840 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Chy10g00840 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy10g00840 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00836 Chy-Chr10:14284128 Chy10g00840 Chy-Chr10:14318939 0 dispersed
Chy10g00837 Chy-Chr10:14288655 Chy10g00840 Chy-Chr10:14318939 0 dispersed
Chy10g00840 Chy-Chr10:14318939 Chy12g01215 Chy-Chr12:16902687 2.54E-46 dispersed
Chy10g00840 Chy-Chr10:14318939 Chy10g00841 Chy-Chr10:14324803 3.13E-51 tandem
Chy10g00840 Chy-Chr10:14318939 Chy12g01229 Chy-Chr12:17018279 1.31E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00840 - - csv:101216216 850.506