Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00884 ATGGAGGTCGACGGCGGAGCCATGGGGGCACCTCACCAGAGGAAATTCTCTCTTCCGGTTGACTCCGAACACAAATCCACCAAATTCAACATATTCTCCGTCGCAGCTCCCCACATGCGAACATTTCATCTCTCTTGGATTTCCTTCTGCGCTTGTTTCATTTCCAGTTTCGCCGCCGCTCCTCTGCTCCCGGTGATTCGTGACAACCTGAATTTAACCGATACCGACATTGGAAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTTTTCGCACGTATCATGATGGGTTCGGCTTGCGATTTAGTCGGACCACGTATCGCCTCTGCTTCACTCATCCTCATAACTTCCCCGGCGGTTTATTTAACCTCTACAGTCTCATCTCCTGTCACGTTTTTCCTCGCCCGATTCTTCACCGGATTCTCCCTCGCTACATTCGTCTCAACCCAATTCTGGATGAGCTCCATGTTCTCCTCCAACGTCGTCGGCACCGCCAATGGCGTCGCCGGCGGCTGGGGGAACTTAGGCGGTGGCGCAACACAGTTAATCATGCCGTATGTTTTCGCCATAATCGAACACATTGGCGCAACGAAATTCACTGCGTGGAGAATCGCTTTCTTCATCCCAGCTTTATTCCAAACGCTTTCCGCCTTCGCGGTTCTCCTCCTGGGCGAGGACACGCCGGACGGGAACTTCGGGCGACTAAAGAAAACAGGGGAAAAGGCAAAAGACAAATTCTCAAAAGTTGTGTACAACGGGGTGACAAATTACAGAGGATGGATTCTGGCATTGACTTATGGGTATTGTTTTGGAGTGGAACTGACGATTGATAACGTAATAGCGAATTACTTTTACGATCGGTTTAATTTGAATCTGCATACGGCAGGGATAGTGGCGGCGAGTTTTGGGCTGGCGAATCTGTTTTCGAGGCCGTACGGCGGAGTGTTGTCTGATGTGGTGGCGAAGAGATATGGGATGAGAGGGAGACTATGGGCTTTGTGGTTGGTTCAAACAATTGGGGGAATTTTGTGTGTGGTTCTTGGATTGGTTGATTCTTTGACTTCTTCTATTGCTGTTATGCTTATCTTCTCTGTGTTTGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTCGTTCCTTTCGTCTCCCGAAGGTCACTAGGAGTAATATCGGGGATGACAGGGGGGGGCGGGAACGTCGGGTCAGTGCTAACACAGCTAATATTCTTTAGAGGCAACAGATACACAAAAGAAAGAGGAATAACTCTAATGGGAGTGATGATAATAGCTTGCACTCTACCAATTGTATTGATTTATTTTCCTCAATGGGGAAGTATGCTTTTGGGGCCATCTTCCAAAATTGCTTCTGAGGAAGATTATTACTTATCTGAATGGAGCGATGAGGAGAAGAACAAAGGCCATCATATGGGAAGCCTTAAGTTTGCTGAGAATAGTAGAAATGAAAGAGGCAAAACCCTCAAAGGAACTGCTGATGCTGACGATGATTCCTCATCTCATGTTTAA 1518 48.16 MEVDGGAMGAPHQRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFISSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRIASASLILITSPAVYLTSTVSSPVTFFLARFFTGFSLATFVSTQFWMSSMFSSNVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAVLLLGEDTPDGNFGRLKKTGEKAKDKFSKVVYNGVTNYRGWILALTYGYCFGVELTIDNVIANYFYDRFNLNLHTAGIVAASFGLANLFSRPYGGVLSDVVAKRYGMRGRLWALWLVQTIGGILCVVLGLVDSLTSSIAVMLIFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGNRYTKERGITLMGVMIIACTLPIVLIYFPQWGSMLLGPSSKIASEEDYYLSEWSDEEKNKGHHMGSLKFAENSRNERGKTLKGTADADDDSSSHV* 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14633896 14636075 + Chy10G180780.1 Chy10g00884 235259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00884 505 Gene3D MFS general substrate transporter like domains 240 443 IPR036259 -
Chy10g00884 505 SUPERFAMILY MFS general substrate transporter 35 438 IPR036259 -
Chy10g00884 505 Pfam Major Facilitator Superfamily 46 402 IPR011701 GO:0022857|GO:0055085
Chy10g00884 505 MobiDBLite consensus disorder prediction 468 505 - -
Chy10g00884 505 CDD MFS_NRT2_like 42 435 IPR044772 GO:0015112
Chy10g00884 505 Gene3D MFS general substrate transporter like domains 35 230 IPR036259 -
Chy10g00884 505 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 1 491 - -
Chy10g00884 505 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 491 IPR044772 GO:0015112
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00884 Chy-Chr10:14633896 Chy12g00827 Chy-Chr12:13493944 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00884 K02575 - csv:101212365 910.598