Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00886 ATGAAGAAACCCTTCAACTTCTCCTTTCTCATTCCCTTCCTTCTAATCCTCTCCTTCTTTCGTCTCCCTATCCAATCTTCAGCTGATCCTAGAGCTACTGAGGCGGCGCTAATATGTTCCAACAACACCGCTTCGCCGGCGGAACGATCGACCTTCGTGGCGAATTTTTTGGACTCTATGGATGCTGTTACTCCACTTATTGCTTCACAGCGATTTGCTGCCGTTATAAATGGGACTGGAAATACGACTGTTTATGCTTTTGGGGAGTGTATGAATGATCTTTCTCAAGCGGATTGTGATCTTTGTTTTGCCCAGATGAAAACTCAGGTCCTGCGGTGTCTTCCATTTCAGCTTGCTACTCGTGGGGGTAGGTTGTTCTATGATGGGTGTTATGTTAGGTATGATTACTATAATTTCTTTAACGAATCTTTGAGTGCTGTGGATAGGACTGTATGTGGGAAATTGGATTATAGTGGGAATCGGAGTGTTTTTAGTGATTCTGCTATGAAATTGGCGAGGAATTTGAGTGTTGTAGCGCCAAAGAATGATGGGTTTGCTGTAGGATCGGTGGATTTTAGGAATGTGTCTGTTTATGGATTGGGTCAGTGTTGGAAATTTGTGAGAGGGAGTTCTTGTTCCAAGTGTTTGGTTGATGCGGCTAAGGAAATTGGTTCTTGTCCTCCAAAAAGTGAAGGAAGGGTGTTGAATGCTGGCTGTTACTTCAGATATTCAACTGAAAAATTTTATTTCAACACCACTGCAACCGCCACAGGAGGAAATAACAGTCGTCGTCTGGCAATAATTTTGGCTTCAGTATCTGCAGCCGTGGCTGCTGCATTGATTATTTCAACAGTCCTATTCTGTGCCAGAAGGAGAGTCTTGAGGAAACGCAACGAGAAAAGGCAACTGGGGCCTCTTGTGGCTATTGTTAACAAGTCCAAGCTTAATTTTTCATATGAGACCCTTGAGAAGGCCACAAATTACTTTGACCAATCCAATAAACTTGGACAAGGAGGTTCCGGTTCAGTTTATAAAGGAACTCTATCAGATGGTAGAGTTGTAGCGATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTTGACCATTTCTTCAATGAAGTAAATCTTATTAGTGGCATCCGACATAAAAATCTTGTAGGCCTGCTTGGATGCAGTATTACGGGCCCTGAAAGCCTCCTTGTTTATGAATATGTTCCCAATCAGAGCTTGCACGATTACCTTTTTGGTAACAAGAACGTCCAGCCACTGAGTTGGCAATCGAGATTTAAGATTGTCTTAGGTACAGCTGAAGGCTTGGCTTATCTCCATGAGGAGTCGAATGTGAAAATCATTCATCGTGACATAAAATTAAGCAATATTCTGCTGGATCATGATTTTACTCCAAAGATTGCTGATTTTGGACTTGCTAGACTGCTTCCTGAAGATAAGACACACATTAGTACTGCAATTGCTGGCACACTAGGTTATATGGCACCAGAATATGTAGTTCGTGGCAAGTTATCAGAAAAGGCAGACGTTTATAGTTTTGGAGTTTTTGCCATAGAAGTTATCACTGGAAGAAGAAATGGTCACTTCTATCAAGATTCAACGTCCATCTTACAAAAGGTATGGAATCTTTATGGAGAGGGAAGGCTATATGCAGGTGTTGATCCGATCCTTGCGGGTGATTATCCACGAGACGAAGCATCTCGGTTGCTTCAAATAGGTCTAGTTTGTGTGCAAGCCTTTGCAGACCTACGGCCATCCATGTCAATGGTTGTGAAAATGCTTACAGCAAATTACGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAATGGAAGCATGAAACCTCAGAATTCCTCAGACTCATCCAATCCCAATTTGTATTACAACTCACGAACCTCTCAAAATAGCATGACCCAAAGCATCATCGACCCTAGATAA 1956 42.33 MKKPFNFSFLIPFLLILSFFRLPIQSSADPRATEAALICSNNTASPAERSTFVANFLDSMDAVTPLIASQRFAAVINGTGNTTVYAFGECMNDLSQADCDLCFAQMKTQVLRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRTVCGKLDYSGNRSVFSDSAMKLARNLSVVAPKNDGFAVGSVDFRNVSVYGLGQCWKFVRGSSCSKCLVDAAKEIGSCPPKSEGRVLNAGCYFRYSTEKFYFNTTATATGGNNSRRLAIILASVSAAVAAALIISTVLFCARRRVLRKRNEKRQLGPLVAIVNKSKLNFSYETLEKATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWQSRFKIVLGTAEGLAYLHEESNVKIIHRDIKLSNILLDHDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNGHFYQDSTSILQKVWNLYGEGRLYAGVDPILAGDYPRDEASRLLQIGLVCVQAFADLRPSMSMVVKMLTANYEIPQPKQPPYLHPSNGSMKPQNSSDSSNPNLYYNSRTSQNSMTQSIIDPR* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14646950 14650716 + Chy10G180800.1 Chy10g00886 235261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00886 651 SMART serkin_6 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00886 651 Gene3D - 146 248 IPR038408 -
Chy10g00886 651 Gene3D - 33 139 IPR038408 -
Chy10g00886 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Chy10g00886 651 Pfam Salt stress response/antifungal 157 245 IPR002902 -
Chy10g00886 651 Pfam Salt stress response/antifungal 39 135 IPR002902 -
Chy10g00886 651 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Chy10g00886 651 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Chy10g00886 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 620 - -
Chy10g00886 651 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Chy10g00886 651 CDD STKc_IRAK 335 598 - -
Chy10g00886 651 ProSiteProfiles Protein kinase domain profile. 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00886 651 Pfam Protein kinase domain 330 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00886 651 MobiDBLite consensus disorder prediction 615 651 - -
Chy10g00886 651 Gene3D Transferase(Phosphotransferase) domain 1 405 608 - -
Chy10g00886 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 22 620 - -
Chy10g00886 651 ProSiteProfiles Gnk2-homologous domain profile. 145 248 IPR002902 -
Chy10g00886 651 SUPERFAMILY Protein kinase-like (PK-like) 315 635 IPR011009 -
Chy10g00886 651 MobiDBLite consensus disorder prediction 607 651 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00886 Chy-Chr10:14646950 Chy02g00370 Chy-Chr2:2359828 8.46E-105 dispersed
Chy10g00886 Chy-Chr10:14646950 Chy03g01718 Chy-Chr3:18702296 4.40E-166 wgd
Chy10g00886 Chy-Chr10:14646950 Chy04g01441 Chy-Chr4:21039699 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71510 PF00069 Pkinase 3.90E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00886 - - csv:101218749 1236.09