Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00904 ATGTCTTCTTCAAACGATACTTCTTCTCCTTCATCGGATTCTGTTTCAGATTCAAGTTTGCCGCCTGAAGCTTCGGATTCTTCTCCTCCTCCTCCTTCTCCTTCTTCGGATTCTTCTTCTCCTCCTCCTTCACCTTCTACTCCACCGTCACCGGTGCCAGATGATTTTTCATCGTTGACATTGAATCAATCTAATGGTCCTTTGCCGTCGATTTTGCCATCCGCAATTAAAGCTCCACCTATCGACGGTGAATCTTCGCCATCTTCCTCACCTCCAGCTCCTCCAAATCCTGGAACTACACCGCCGGCTCCTACTGGCGGTTCCGATTCAAATAATTCCGACGAGAATCCATCGCCACCGCCTGAAGACTCTGCTTCGCCACCACTGTCTCCTCCGCCGTCGCCTCGTCCACCACCGCCTTCGCCACCGCCTCCTCAAGACCCGTCCGTGGTTGGTGTCGTTGATCCTCCACCTTCCCCTGTTCCAACTACAAAAGCATCTCAAGCACCTCCAAGAAGTCCACCTTCTCCAATATCTGAGAAAGATCCCTCTACTCCAGTGGATCAAAGCGCCATTCAGGCACCTAATACACGCGAGGAGACTCAACCATCTACACCGACGGATCCTCTTCCTCCATCAGAAAATCCAGTTGTGATTCCTTCACCAGGTGCAAACCCAGCAACGGGAAAACGAACTCCAAGTTCACCTGAAGGAACAATAACTACTCCCACATCAGAGTCTAACATTCTTTCACCTCCCACAGCCACATCCACTCGCACTCCAAACAACTCACCTCATTCCTCCGACTCAACGCCAGTGAAATCACCATTAGGACAGTCCAATGCACCATCAACTGGTTTACGTAGTCATACTGATGTTGCAGTCGGTGCTGCAGTTGCTGGAGTTTTTGTAATCGCTTTGTTTGCTGTGATTTTTGTGTTCACAAGGAAGAAGAAAAGACGGGGAAAGATGTACACCGGCCCCTACATGCCTCCAAAAAACTTTTGTGTGAAAGCAGATGGAAATTACTATCCACAACAACAGGGGGGCAACTCTGGTTCTTCCGAAGGCTTCTACACTCAAGTCCCACATACTCCCCTTGGAAATAGCTTTGGGAGTCAAAAAGGAACAGGATACAGTGGCAGTGGAATGGAGTCAGGTGTGATAAACAGTGCCAAGTTCTACTTTAGCTATGAAGAATTAATGGAGGTTACATCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTATCAGGGTTGGCTTCCAGAAGGGAAGACTGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATCATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTATTGCGTCGCCGAGCGTCATAGATTGCTCATCTATGAGTTTGTTCCTAATAAGACTCTTGAGCATCATCTCCACGGTAAAGGAGTATCCGTGCTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGATCTGCAAAGGGTTTGGCATATCTTCATGAAGATTGCCATCCCAGAATTATCCACCGAGACATCAAATCAGCCAACATTTTGCTGGACGACGCTTTTGAGGCGCAGGTTGCAGATTTTGGACTTGCGAAACTGACAAACGATACAAATACCCACGTTTCCACTCGTGTCATGGGGACATTTGGATACATGGCTCCCGAGTATGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATAACAGGTCGTAAGCCTGTTGATTCCACTCAGCCCCTGGGGGATGAGAGTTTGGTCGAATGGGCTCGTCCTCACCTTCTGCACGCCCTTGAAACTGGGGAGTTTGACGGATTAGTAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCGGCAGCTGCCTGCGTTCGTCACTCGGCTCCTAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATGTCTGACCTCTCCAATGGTGTCAAATACGGGCAAAGCACCATGTATGATTCTGGGCAATACAATCAAGACATTTCAAGATTCAGAAGAATGGCACTCGGTACAGACAGCTTCGACTACGACAGTTACAGTAGTGAATACAATTCCGGAGAAATGAATGCAAGTCGTGCATCGTGGAGATTCCAGAATAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAAGGACGATCTGTGATATCACAAAATCACTCTGGCGGTAGACAATTCTAA 2331 47.79 MSSSNDTSSPSSDSVSDSSLPPEASDSSPPPPSPSSDSSSPPPSPSTPPSPVPDDFSSLTLNQSNGPLPSILPSAIKAPPIDGESSPSSSPPAPPNPGTTPPAPTGGSDSNNSDENPSPPPEDSASPPLSPPPSPRPPPPSPPPPQDPSVVGVVDPPPSPVPTTKASQAPPRSPPSPISEKDPSTPVDQSAIQAPNTREETQPSTPTDPLPPSENPVVIPSPGANPATGKRTPSSPEGTITTPTSESNILSPPTATSTRTPNNSPHSSDSTPVKSPLGQSNAPSTGLRSHTDVAVGAAVAGVFVIALFAVIFVFTRKKKRRGKMYTGPYMPPKNFCVKADGNYYPQQQGGNSGSSEGFYTQVPHTPLGNSFGSQKGTGYSGSGMESGVINSAKFYFSYEELMEVTSGFSRQNILGEGGFGCVYQGWLPEGKTVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVAERHRLLIYEFVPNKTLEHHLHGKGVSVLDWSKRLKIALGSAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTNTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDSTQPLGDESLVEWARPHLLHALETGEFDGLVDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDMSDLSNGVKYGQSTMYDSGQYNQDISRFRRMALGTDSFDYDSYSSEYNSGEMNASRASWRFQNNSSGESETQAFKGRSVISQNHSGGRQF* 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14739630 14742678 - Chy10G180980.1 Chy10g00904 235279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00904 776 Gene3D Transferase(Phosphotransferase) domain 1 484 698 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 24 52 - -
Chy10g00904 776 Gene3D Phosphorylase Kinase; domain 1 377 483 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 749 776 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 103 119 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 205 219 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 182 204 - -
Chy10g00904 776 Pfam Protein tyrosine and serine/threonine kinase 411 619 IPR001245 GO:0004672|GO:0006468
Chy10g00904 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Chy10g00904 776 MobiDBLite consensus disorder prediction 120 181 - -
Chy10g00904 776 ProSiteProfiles Protein kinase domain profile. 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00904 776 MobiDBLite consensus disorder prediction 227 287 - -
Chy10g00904 776 CDD STKc_IRAK 414 682 - -
Chy10g00904 776 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 124 748 - -
Chy10g00904 776 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 124 748 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 1 23 - -
Chy10g00904 776 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Chy10g00904 776 MobiDBLite consensus disorder prediction 1 287 - -
Chy10g00904 776 SUPERFAMILY Protein kinase-like (PK-like) 388 681 IPR011009 -
Chy10g00904 776 MobiDBLite consensus disorder prediction 53 70 - -
Chy10g00904 776 MobiDBLite consensus disorder prediction 85 102 - -
Chy10g00904 776 SMART serkin_6 408 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02190 Chy-Chr2:26072814 Chy10g00904 Chy-Chr10:14739630 3.82E-69 dispersed
Chy07g01290 Chy-Chr7:17560875 Chy10g00904 Chy-Chr10:14739630 2.32E-162 dispersed
Chy10g00904 Chy-Chr10:14739630 Chy10g01098 Chy-Chr10:16036981 4.29E-156 dispersed
Chy10g00904 Chy-Chr10:14739630 Chy09g00148 Chy-Chr9:1259517 1.04E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71511 PF07714 PK_Tyr_Ser-Thr 2.30E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00904 - - csv:101215732 1215.68