Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g00904 | ATGTCTTCTTCAAACGATACTTCTTCTCCTTCATCGGATTCTGTTTCAGATTCAAGTTTGCCGCCTGAAGCTTCGGATTCTTCTCCTCCTCCTCCTTCTCCTTCTTCGGATTCTTCTTCTCCTCCTCCTTCACCTTCTACTCCACCGTCACCGGTGCCAGATGATTTTTCATCGTTGACATTGAATCAATCTAATGGTCCTTTGCCGTCGATTTTGCCATCCGCAATTAAAGCTCCACCTATCGACGGTGAATCTTCGCCATCTTCCTCACCTCCAGCTCCTCCAAATCCTGGAACTACACCGCCGGCTCCTACTGGCGGTTCCGATTCAAATAATTCCGACGAGAATCCATCGCCACCGCCTGAAGACTCTGCTTCGCCACCACTGTCTCCTCCGCCGTCGCCTCGTCCACCACCGCCTTCGCCACCGCCTCCTCAAGACCCGTCCGTGGTTGGTGTCGTTGATCCTCCACCTTCCCCTGTTCCAACTACAAAAGCATCTCAAGCACCTCCAAGAAGTCCACCTTCTCCAATATCTGAGAAAGATCCCTCTACTCCAGTGGATCAAAGCGCCATTCAGGCACCTAATACACGCGAGGAGACTCAACCATCTACACCGACGGATCCTCTTCCTCCATCAGAAAATCCAGTTGTGATTCCTTCACCAGGTGCAAACCCAGCAACGGGAAAACGAACTCCAAGTTCACCTGAAGGAACAATAACTACTCCCACATCAGAGTCTAACATTCTTTCACCTCCCACAGCCACATCCACTCGCACTCCAAACAACTCACCTCATTCCTCCGACTCAACGCCAGTGAAATCACCATTAGGACAGTCCAATGCACCATCAACTGGTTTACGTAGTCATACTGATGTTGCAGTCGGTGCTGCAGTTGCTGGAGTTTTTGTAATCGCTTTGTTTGCTGTGATTTTTGTGTTCACAAGGAAGAAGAAAAGACGGGGAAAGATGTACACCGGCCCCTACATGCCTCCAAAAAACTTTTGTGTGAAAGCAGATGGAAATTACTATCCACAACAACAGGGGGGCAACTCTGGTTCTTCCGAAGGCTTCTACACTCAAGTCCCACATACTCCCCTTGGAAATAGCTTTGGGAGTCAAAAAGGAACAGGATACAGTGGCAGTGGAATGGAGTCAGGTGTGATAAACAGTGCCAAGTTCTACTTTAGCTATGAAGAATTAATGGAGGTTACATCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTATCAGGGTTGGCTTCCAGAAGGGAAGACTGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATCATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTATTGCGTCGCCGAGCGTCATAGATTGCTCATCTATGAGTTTGTTCCTAATAAGACTCTTGAGCATCATCTCCACGGTAAAGGAGTATCCGTGCTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGATCTGCAAAGGGTTTGGCATATCTTCATGAAGATTGCCATCCCAGAATTATCCACCGAGACATCAAATCAGCCAACATTTTGCTGGACGACGCTTTTGAGGCGCAGGTTGCAGATTTTGGACTTGCGAAACTGACAAACGATACAAATACCCACGTTTCCACTCGTGTCATGGGGACATTTGGATACATGGCTCCCGAGTATGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATAACAGGTCGTAAGCCTGTTGATTCCACTCAGCCCCTGGGGGATGAGAGTTTGGTCGAATGGGCTCGTCCTCACCTTCTGCACGCCCTTGAAACTGGGGAGTTTGACGGATTAGTAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCGGCAGCTGCCTGCGTTCGTCACTCGGCTCCTAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATGTCTGACCTCTCCAATGGTGTCAAATACGGGCAAAGCACCATGTATGATTCTGGGCAATACAATCAAGACATTTCAAGATTCAGAAGAATGGCACTCGGTACAGACAGCTTCGACTACGACAGTTACAGTAGTGAATACAATTCCGGAGAAATGAATGCAAGTCGTGCATCGTGGAGATTCCAGAATAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAAGGACGATCTGTGATATCACAAAATCACTCTGGCGGTAGACAATTCTAA | 2331 | 47.79 | MSSSNDTSSPSSDSVSDSSLPPEASDSSPPPPSPSSDSSSPPPSPSTPPSPVPDDFSSLTLNQSNGPLPSILPSAIKAPPIDGESSPSSSPPAPPNPGTTPPAPTGGSDSNNSDENPSPPPEDSASPPLSPPPSPRPPPPSPPPPQDPSVVGVVDPPPSPVPTTKASQAPPRSPPSPISEKDPSTPVDQSAIQAPNTREETQPSTPTDPLPPSENPVVIPSPGANPATGKRTPSSPEGTITTPTSESNILSPPTATSTRTPNNSPHSSDSTPVKSPLGQSNAPSTGLRSHTDVAVGAAVAGVFVIALFAVIFVFTRKKKRRGKMYTGPYMPPKNFCVKADGNYYPQQQGGNSGSSEGFYTQVPHTPLGNSFGSQKGTGYSGSGMESGVINSAKFYFSYEELMEVTSGFSRQNILGEGGFGCVYQGWLPEGKTVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVAERHRLLIYEFVPNKTLEHHLHGKGVSVLDWSKRLKIALGSAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTNTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDSTQPLGDESLVEWARPHLLHALETGEFDGLVDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDMSDLSNGVKYGQSTMYDSGQYNQDISRFRRMALGTDSFDYDSYSSEYNSGEMNASRASWRFQNNSSGESETQAFKGRSVISQNHSGGRQF* | 777 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 14739630 | 14742678 | - | Chy10G180980.1 | Chy10g00904 | 235279 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g00904 | 776 | Gene3D | Transferase(Phosphotransferase) domain 1 | 484 | 698 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 24 | 52 | - | - | |
Chy10g00904 | 776 | Gene3D | Phosphorylase Kinase; domain 1 | 377 | 483 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 749 | 776 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 103 | 119 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 182 | 204 | - | - | |
Chy10g00904 | 776 | Pfam | Protein tyrosine and serine/threonine kinase | 411 | 619 | IPR001245 | GO:0004672|GO:0006468 | |
Chy10g00904 | 776 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 528 | 540 | IPR008271 | GO:0004672|GO:0006468 | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 120 | 181 | - | - | |
Chy10g00904 | 776 | ProSiteProfiles | Protein kinase domain profile. | 408 | 687 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 227 | 287 | - | - | |
Chy10g00904 | 776 | CDD | STKc_IRAK | 414 | 682 | - | - | |
Chy10g00904 | 776 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 124 | 748 | - | - | |
Chy10g00904 | 776 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED | 124 | 748 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Chy10g00904 | 776 | ProSitePatterns | Protein kinases ATP-binding region signature. | 414 | 436 | IPR017441 | GO:0005524 | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 1 | 287 | - | - | |
Chy10g00904 | 776 | SUPERFAMILY | Protein kinase-like (PK-like) | 388 | 681 | IPR011009 | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 53 | 70 | - | - | |
Chy10g00904 | 776 | MobiDBLite | consensus disorder prediction | 85 | 102 | - | - | |
Chy10g00904 | 776 | SMART | serkin_6 | 408 | 681 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02190 | Chy-Chr2:26072814 | Chy10g00904 | Chy-Chr10:14739630 | 3.82E-69 | dispersed | |
Chy07g01290 | Chy-Chr7:17560875 | Chy10g00904 | Chy-Chr10:14739630 | 2.32E-162 | dispersed | |
Chy10g00904 | Chy-Chr10:14739630 | Chy10g01098 | Chy-Chr10:16036981 | 4.29E-156 | dispersed | |
Chy10g00904 | Chy-Chr10:14739630 | Chy09g00148 | Chy-Chr9:1259517 | 1.04E-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71511 | PF07714 | PK_Tyr_Ser-Thr | 2.30E-45 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g00904 | - | - | csv:101215732 | 1215.68 |