Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00917 ATGGTTATGGATCTGGAAAGTGGAGTTGTTAATGAAAAGAACGCGAAGAAAGATTCATGGAGGACGATTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGAGAGTTGGGAACTTCGCCTTTATATGTGTATAGGAACACTTTTGCAGAAGAAGATATCAATCATACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTCACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGTGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCTCGAGTTAGCTCATTGCCTAATACCCAGTTGGCTGATTCTGAACTTACTGAGTATAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTTAAACTCAAATCAGCATTAGAAAAGCGTCGGGTTCTGCAGAAATTCTTGCTTGTTCTTGCTTTAATTGGGACTTGCATGGTGATAGGGGATGGCATCTTAACTCCAGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTTGAGCATACCATGGCAAAAGAACATCACCAATATATAGTGATCCCAATTGCATGCATCGTACTGATATGCCTGTTTGCTCTTCAGCACTATGGCACGCACAGGATTGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTATTGTGTATTAGTGTTATTGGCCTTTACAATATTATCCATTGGAATCCCCGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAATTTCTTAAGAAAACCCAAAAAGGAGGCTGGATGTCACTTGGTGGAATAATGCTGTGCATTACCGGTTCGGAGGCGATGTTTGCTGACCTTGGTCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCATCTCTTCTCCTAGCATACATGGGGCAAGCTGCTTATCTGTCTCAACATCATCCCTCTTCAAATGAACATCCGATTGGATTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCCGTGCTTGCAGCAGTAGTCGGAAGTCAGGCTATAATCACTGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGTTTTCCTCGGGTTAAAATTATTCATACGTCTTCAAAAGTTCACGGTCAGATCTATATCCCGGAGGTCAATTGGATTTTGATGCTGTTATGCCTGGCAGTTACCTTAGGTTTCAGAGACACTAAGCGCTTGGGCCATGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACATGCTTGATGTCACTCGTTATTGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTCTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTCATAAAGTTTCTTGAAGGAGCTTGGGTTCCTATTGCGATTTCTTTTGTATTCCTGATCGTTATGTATGTCTGGCACTACGGAACTCTTAAGAAGTTTGAATTTGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTGGGTCGCAGCTTAGGCATTGTAAGAGTCCGTGGGATTGGTGTTGTACAGACAGAGCTTGTTTCGGGTATCCCTGGTATCTTCACCCACTTTGTCACCAATATCCCTGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAACACGTCCCAGTGCCACACGTTAGACCAGAAGAACGGTTTCTAATTGGTCGTATTGATACGAGTGAATACAGACTCTATCGGTGCATTGCACGATATGGGTATCGAGATGTTCACAAAGACGACGTAGAGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTCCACAGTCCAGTGATTGTAAACCGGACTTTGATAAAGACGGTGAAAAGATGTCAGTCGTCGGGGCATCTTCTAACCATGAAGATAGGATTCAGATGGCCGAGACCGATAACGAGGAAGACTCTGAAGAACTGTTCCAAGCTTCAGATACAAGAGAAATAAGGTCACCAACTCCAGTACAATTGAGAAAAAGAGTACGCTTCATCTTACCCGAGAGCCCGAAAATCAACACCGGTGCAATGGAAGAATTGCATGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGATCACACATGAAAGCAAAACAAGGATCAAGCATGCTGAAAAGAGTGTCAATTGACTTCATTTACGAGTTCTTGAGAAAAAACAGCAGAGAAGCTGACTTCCCAGTAGGTTTATCACATTCATCATCAACTCTTGAGGTGGGTATGATGTATCTTGTTTAA 2358 41.98 MVMDLESGVVNEKNAKKDSWRTILMMAYQSLGVVYGELGTSPLYVYRNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYIVIPIACIVLICLFALQHYGTHRIGFLFAPIVIVWLLCISVIGLYNIIHWNPRVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPSSNEHPIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISFVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSLGRSLGIVRVRGIGVVQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKHVPVPHVRPEERFLIGRIDTSEYRLYRCIARYGYRDVHKDDVEFENDLICSIAEFIRSGTPQSSDCKPDFDKDGEKMSVVGASSNHEDRIQMAETDNEEDSEELFQASDTREIRSPTPVQLRKRVRFILPESPKINTGAMEELHELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV* 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14824992 14829828 + Chy10G181110.1 Chy10g00917 235292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00917 785 PANTHER POTASSIUM TRANSPORTER 6 3 784 - -
Chy10g00917 785 MobiDBLite consensus disorder prediction 654 679 - -
Chy10g00917 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy10g00917 785 Pfam K+ potassium transporter 28 609 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy10g00917 785 TIGRFAM kup: potassium uptake protein 26 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy09g00327 Chy10g00917 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00329 Chy-Chr10:8170016 Chy10g00917 Chy-Chr10:14824992 0 dispersed
Chy10g00917 Chy-Chr10:14824992 Chy12g00312 Chy-Chr12:3377780 0 dispersed
Chy10g00917 Chy-Chr10:14824992 Chy04g01475 Chy-Chr4:21404996 0 wgd
Chy10g00917 Chy-Chr10:14824992 Chy09g00327 Chy-Chr9:2823954 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00917 K03549 - csv:101212925 1530.0