Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00918 ATGGCATCAAGATCTACCGCTAACTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTTCCTCGTACACCCAGGTCCCTGCCACGAGTAATGACTGCTCCTGGAATTATTTCTGAATTGGATGATTATGGGAGTAATGACGGAGACTCGGAGTCTTCATCTGTATACCGTGAGCGCAAAATCATAGTTGCAAATATGTTACCTGTGCACGCTAAAAAAGATGGGCAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAACTAAAGAATGGGTTTTCACCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAGCAGGAGGAGGTTGCTCAGAAACTGTTCGACAATTTTAACTGTGTACCTACATTTCTTCCTCATGATCTCCAGAAGAACTTTTATATTGGGTTTTGCAAACAGCAGCTATGGCCTTTATTCCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCAATCGGCAGCTCTGGCAAGCCTATGTTTCTGCGAATAAACTATTTGCTGATAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTGTTTGGGTTCATGATTATCATTTAATGGTTCTTCCTACATTCCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGTCTGTTAAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCCCGTCACTTCCTCTCATGCTGCAGCAGAATGCTGGGCTTGGATTATGAATCGAAGCGTGGTCATATTGGACTAGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGCATTCACATGGGCCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAATTAATTCTTGGTATTGATGATATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTTGCTGTGGAACAGCTTTTACGGCAACATCCTTCGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGGAAAGATGTGCATGAAGCTCAGAAGGAAGCCTACTTGGCTGCTGAAAGGATCAACGAAGCTTACGGTTCAAGTAACTACAAACCAGTAATTTTGATTGATCGCCATGTCCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAAGGAACTCCTCTTATGGATGAGGCTATGGGCTTACAAATTGGTTCTCCTCGAACGAGTATGCTTGTGGTGTCTGAGTTTATTGGTTGCTCGCCTTCTTTAAGTGGAGCAATCAGGGTTAATCCTTGGGACATTGATGCTGTTGCCGATGCATTGGAACTAGCTATAACCATGCAGGAGTCAGAGAAGCAGCTGCGACATGAGAAACATTATCGATATGTCAGTTCCCACGATATTGGATATTGGTCTCGTAGTTTTATGCAAGATTTGGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGTTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATCGATCACATTGTCTCGGCTTATAAAAGAACTCATAGAAGAGCAATATTTTTGGATTATGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCGAGCCCTGAAGTTATCTCAGTCTTGACTACTCTTTGCAACGATCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTTGTCTCTTGTGAGATGTTGGGGATTGCAGCGGAACATGGCTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACTAGTCCACTGTCTTCTGATCTTGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACGGAAGCAACAGATGGCTCGTGCATAGAACAGAAAGAAAGTGCTTTAGTCTGGCACCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAACGAACCAGCCGTTGTTAAAAGAGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCAAGAATGGTGGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATAGATCAGATGAAGATATGTTTGAGAGCATATTAAGTACCGTCTCCAGTCCTTCACTCCCTTCTGCTCCAGAAATCTTCGCCTGTACTGTTGGACGAAAGCCAAGCAAGGCTAAGTTTTACCTCGACGATACTTCCGACGTTGTTAAATTGCTGCAATGCCTTGCCTCGTCGTCACGTCCAAGACCCCGACAGCTACCACAGATGCGTGTTTCTTTCGAGAGTGTTTTCTAA 2583 43.28 MASRSTANFLDLASGDLLDVPRTPRSLPRVMTAPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPVHAKKDGQSGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDASEQEEVAQKLFDNFNCVPTFLPHDLQKNFYIGFCKQQLWPLFHYMLPMCPEHGDRFNRQLWQAYVSANKLFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHPSLRGKIVLVQIVNPARGSGKDVHEAQKEAYLAAERINEAYGSSNYKPVILIDRHVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDEAMGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFVSCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEQKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF* 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14841488 14844462 + Chy10G181120.1 Chy10g00918 235293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00918 860 Gene3D - 590 717 IPR023214 -
Chy10g00918 860 Gene3D - 719 848 IPR023214 -
Chy10g00918 860 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 847 - -
Chy10g00918 860 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Chy10g00918 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Chy10g00918 860 CDD HAD_TPP 592 833 - -
Chy10g00918 860 Gene3D Glycogen Phosphorylase B; 317 529 - -
Chy10g00918 860 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 793 IPR006379 -
Chy10g00918 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
Chy10g00918 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Chy10g00918 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 847 IPR001830 GO:0003824|GO:0005992
Chy10g00918 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Chy10g00918 860 Gene3D Glycogen Phosphorylase B; 47 316 - -
Chy10g00918 860 TIGRFAM T6PP: trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00325 Chy-Chr1:2333737 Chy10g00918 Chy-Chr10:14841488 9.90E-77 transposed
Chy01g00326 Chy-Chr1:2334885 Chy10g00918 Chy-Chr10:14841488 0 transposed
Chy02g00214 Chy-Chr2:1426609 Chy10g00918 Chy-Chr10:14841488 0 transposed
Chy03g01021 Chy-Chr3:13803091 Chy10g00918 Chy-Chr10:14841488 4.92E-07 transposed
Chy06g00820 Chy-Chr6:5757131 Chy10g00918 Chy-Chr10:14841488 2.26E-33 transposed
Chy06g02157 Chy-Chr6:25872096 Chy10g00918 Chy-Chr10:14841488 0 transposed
Chy07g00463 Chy-Chr7:3700312 Chy10g00918 Chy-Chr10:14841488 6.14E-138 transposed
Chy07g01323 Chy-Chr7:17891795 Chy10g00918 Chy-Chr10:14841488 5.19E-07 transposed
Chy12g00042 Chy-Chr12:356437 Chy10g00918 Chy-Chr10:14841488 1.47E-140 transposed
Chy10g00918 Chy-Chr10:14841488 Chy02g02567 Chy-Chr2:28885919 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00918 K16055 - csv:101212688 1740.32