Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00923 ATGATCATGGAAGTAAAGGGAGGAGGAATATTGGAAATGGTGGTTCCATTTTTAGCTATGGTCACCATGGAGGGTTGCACAATTGCATTAACAATATTGGCTAAAACTGCCATTACTTATGGAATGTCTACTTTTGTTTTTGTTGTTTATACAAATGCTGTTGCTTCCATCATTCTTCTTCCTTATTCCTTCATCTTTCATTACAATCAAAGATTGGAATTTCAACAATCTTTGTTTTCCTTTCCTCTTCTCCTTCGAGTTTTCCTCTTGGGTTTAACTGGGATATGTATATCTCAAAACCTAGCATTTTTGGGCCTAAGTTACAGCTCTCCCATTGTTGTATGTGCAATGGGTCTTATGCTTCCGGCCATTTCCTTCCTACTCTCAATCCTTCTCAGGAAGACAAAAATGGAGTGGAAAAATCCCAACTTCATTACAAAAGTGGTTGGGACAGTTATTTCAGTTGTAGGAGCAACATGCGAAGAACTTTACCTAGGGCCAACTGTACGGCAACATCCATCTTCTTCGACACATTTACAGTTTAAACAGAAGCTTTTGGTGTTTACTTCAACCACAGATCGTTGGATTTTTGGTGGCCTTTTATTAGCAGCTGCTACATTATGTGTCTCTATATGGAACATTATTCAGTTGGGAGTTGTAAAACAGTACTCGCAAGTGATGAAAGTTGGCTCATTTTATAGTATAGTGGGCACATTTATGTCAGCAATTGTGGCTTACTTTGTTGTCAATGATTCAAGTGCATGGACAATCAAATCTAGCTTCGACCTCTATCTCATCATTGCAACTGGAACTTTTAGCGGTTTGATTCGAAATCGAGTGCAAATATGGTGCATGCAAAAGAAAGGGCCGTATTATGTGCCCATGTTTAAGCCTTTTGGTATTCTGTTTGCTACCTTCTTTGGTGCCACCTTCTTTGGCGACACTTTTCACTATGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGGTATTTAACAGTAATGTGGGGGCAAATTAACGAAGATCGTGGAGTAGGAAAAGACAAAGATGTTGACAAGAATAATGATGATTCATTGTCTTCAGCCAAAGTTCCACTTCTTGATGATGAAGAATCAAATGTGATTCAACAACCATCATCTTCCCCAAGCTCCTCTCCAAGTACTATAAAAGCATCGAAGTCCTCGAAGGCGACGAAAAGCAGTCGGTTCGATTCGCATTCCTTTCACCTTGTGGATATTCATGTATTAAGTTCTCGGATTAAAGAGAGGACCGAGGCTGTAGACGAGGAAAAGAAGACGGTATCTGACAGCGTGATACAAGGGAGTGTTCTGAAATACTACAAGAGTTTCAAGGGGCACATTGTTGTGAATCCTAAAGAAGATGGAAATGGGAGTTTAGTGAAATGGAGTTCTGAGTTTGAGAAGCCTAGTGAAGAGATGATGAGGATAATAGTATACAATCAATTGATCGACCGAATTCAGTAA 1485 39.66 MIMEVKGGGILEMVVPFLAMVTMEGCTIALTILAKTAITYGMSTFVFVVYTNAVASIILLPYSFIFHYNQRLEFQQSLFSFPLLLRVFLLGLTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFLLSILLRKTKMEWKNPNFITKVVGTVISVVGATCEELYLGPTVRQHPSSSTHLQFKQKLLVFTSTTDRWIFGGLLLAAATLCVSIWNIIQLGVVKQYSQVMKVGSFYSIVGTFMSAIVAYFVVNDSSAWTIKSSFDLYLIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGILFATFFGATFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDRGVGKDKDVDKNNDDSLSSAKVPLLDDEESNVIQQPSSSPSSSPSTIKASKSSKATKSSRFDSHSFHLVDIHVLSSRIKERTEAVDEEKKTVSDSVIQGSVLKYYKSFKGHIVVNPKEDGNGSLVKWSSEFEKPSEEMMRIIVYNQLIDRIQ* 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14895853 14901507 + Chy10G181170.1 Chy10g00923 235298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00923 494 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Chy10g00923 494 SMART Bet_v_1_2 394 492 IPR000916 GO:0006952
Chy10g00923 494 Pfam Pathogenesis-related protein Bet v 1 family 419 481 IPR000916 GO:0006952
Chy10g00923 494 Gene3D - 380 493 IPR023393 -
Chy10g00923 494 MobiDBLite consensus disorder prediction 372 396 - -
Chy10g00923 494 MobiDBLite consensus disorder prediction 370 400 - -
Chy10g00923 494 Pfam EamA-like transporter family 30 158 IPR000620 GO:0016020|GO:0016021
Chy10g00923 494 SUPERFAMILY Bet v1-like 420 480 - -
Chy10g00923 494 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy09g00320 Chy10g00923 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00321 Chy-Chr9:2758108 Chy10g00923 Chy-Chr10:14895853 1.76E-49 dispersed
Chy10g00923 Chy-Chr10:14895853 Chy08g00232 Chy-Chr8:5223604 2.25E-44 dispersed
Chy10g00923 Chy-Chr10:14895853 Chy10g00924 Chy-Chr10:14902866 1.37E-26 tandem
Chy10g00923 Chy-Chr10:14895853 Chy04g01478 Chy-Chr4:21426457 1.71E-43 wgd
Chy10g00923 Chy-Chr10:14895853 Chy09g00320 Chy-Chr9:2737732 1.03E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00923 - - csv:101210157 681.404