Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00942 ATGGATTCTCTATCGCACCTTATTCTCTTCCTCTTCTTCCTTTCTCTTTCCCCTGTTTCTTACTCCCAACTCAGCCCCCCTCAAAATATCGAAACTTTCTACCCTTTCCCTCAACCACCCTCGCCCTCCTCTTCTTCAGTTGACCATCCCCCGTCGTCCACCTCCACCAAGACCATCGCCACCGCGGTGGCCGTCACTGCTGTGGGTGTTGCTCTGATTTCCACCTTGTTCTTCTTTTTAATACAGAGATATGTTATCGGAAGAAAGAGGAAAACAGAGGTGGTAAATTCAGGGACGGGTTCGGGTTCGGTAGTGCCGCCGGTGGTTGCTCAGAGTGAATTTTCGCGGGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAAACTTGAGAAAAGGAAATCCAAAAATAGCTTTGATCGGGATGTTGAAGGTAATGTTAAGGAAAACCGAACCAAAAAGTCTGAGCCTGTTCAAGAAATTCCTCTGCTCCGAGGAAAATCTTCAACTTCGCATGTTAAAATTGCACCCGAAGATGAAGACGATAGTCGGATTACATCGCCACCGCCTCCTCCGCCGCCCCAGCTTAACCAACCTCCGCAATTTACTGCGATTTCTGTTCAGGCTGTTGGAAAATCACCAAGTAGTTCAAATCTTTCATCAACAGCACCAACGCAATCGACGGGAAATCAGGTACCTCCGAAACAACCTCCAATGGCCGTTCCGCCACCACCCCCACCCATTCCAGCCAAGACCAATTCAAGACTGCCGCCACCGCCACCTCCCATTCCCAAGACCAATTCAAGACCGCCGCCGCCGCCGCCTCCTATTCAACCCAAGACCAACTACGCAGGACCACCTCCTCCTCCTATACCGGCCAAGGCAAATTCGTCAGCACCACCGCCGCCCAAGGCCGGCGGTTCAAAATTACCCTTAAGGCCTGCACCTCCAAAAGAGAGTAACAAATCTTCTGCAGAGGCTTCTTCATCAGCTGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCCAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTCGATGGGGACCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAACCGGAAATCCCCCCGGAGTGAAGCTAGTTCTTCAGCAAACGCCGTTGGCCGGAACTCGGGGCCGTCGCAAACTTTCATTCTTGAACAGAAAAAATCTCAGAACATTGCCATTGTAATCAAGTCCTTAACAGTTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGCCTGGAAACAGAGGTTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCTCAAATTCTTGCTTACAAAGGAGATCCCCAGAAGCTAGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCGGCCTTTACGCGCTTCAACTCCATGCTTTTCCGATTGAATTTTACATCAGAGATTCTCCATCACAAGGAATCTCTACAAACTCTGGAATCCGCTTGCAAGGAGCTTAGGACACGAGGATTGTTTATGAAACTTCTTGAAGCAATTCTCAAAGCTGGGAACCGGTTGAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAATCTTACAGCTCTTCGAAAGCTCTCTGATGTTCGAAGCACTGATGGGAAAACCACTTTGCTTCATTTTGTAGTCCAGGAAGTGATCAGGGCAGAAGGGAAAAGGTGTGTTTTAAACAGGAACAAGAGCTTGAGCCGTAATAGCAGCCGTAGCAGCGACAATAGCTTTAGCAGCTTAGAAAACTCGACTGCAAAGGAGGACAGAGTGAAGGAATACATGATGTTGGGATTGCCAGTGGTGGGAGGTCTAAGCTCCGAATTCTCTCATGTAAAGAAAGCGTCAGCGATCGACTACGAGAGCTTCGTCAAAGCAGGTTCGTCCCTGACTAGTCGAACCGAAGAAATCCGGAAGCTCCTGACTCAAATGGGGAACAATGAAGGTGGGTTTGCGAAGGAAATGAGAGAATTTCTTGACGCAGCAGAGGATGAGCTGAAGATGGTGAGAGAAGCACAAACGAGGGTGATGGATTTAGTGATGAAGACAACGGAGTATTATCAGGCAGGAAGTTCTAAAGATAAAGAAACAAATCGGCTTCAATTGTTTATTATAATTAAAGATTTTCTAGAAATGGTAGATCGAGTTTGTGTTGAAATTACTCGAGAACTCCAGAGGAAGAGATCGTCAGCAGTAAATGCAGCTACAGGTTCGGGTTCGGGTTCGTCACCGGGGAGATCAAAAGCCATTTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCTAGAGGGAGTTCTAGTGATACAGATGATGAATTTTGA 2451 46.84 MDSLSHLILFLFFLSLSPVSYSQLSPPQNIETFYPFPQPPSPSSSSVDHPPSSTSTKTIATAVAVTAVGVALISTLFFFLIQRYVIGRKRKTEVVNSGTGSGSVVPPVVAQSEFSRVDGNLKGFIVDENGLDVIYWKKLEKRKSKNSFDRDVEGNVKENRTKKSEPVQEIPLLRGKSSTSHVKIAPEDEDDSRITSPPPPPPPQLNQPPQFTAISVQAVGKSPSSSNLSSTAPTQSTGNQVPPKQPPMAVPPPPPPIPAKTNSRLPPPPPPIPKTNSRPPPPPPPIQPKTNYAGPPPPPIPAKANSSAPPPPKAGGSKLPLRPAPPKESNKSSAEASSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSSANAVGRNSGPSQTFILEQKKSQNIAIVIKSLTVPRNEILDALNEGQGLETEVLEKLTRIALTQEEISQILAYKGDPQKLADAESFLYHLLKSVPSAFTRFNSMLFRLNFTSEILHHKESLQTLESACKELRTRGLFMKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSLSRNSSRSSDNSFSSLENSTAKEDRVKEYMMLGLPVVGGLSSEFSHVKKASAIDYESFVKAGSSLTSRTEEIRKLLTQMGNNEGGFAKEMREFLDAAEDELKMVREAQTRVMDLVMKTTEYYQAGSSKDKETNRLQLFIIIKDFLEMVDRVCVEITRELQRKRSSAVNAATGSGSGSSPGRSKAIFHNLPENFMSDKSRGSSSDTDDEF* 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15003808 15006339 + Chy10G181360.1 Chy10g00942 235317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00942 816 MobiDBLite consensus disorder prediction 393 411 - -
Chy10g00942 816 SUPERFAMILY Formin homology 2 domain (FH2 domain) 266 770 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 330 344 - -
Chy10g00942 816 Gene3D Formin, FH2 domain 357 779 IPR042201 -
Chy10g00942 816 SMART it6_source 337 770 IPR015425 -
Chy10g00942 816 MobiDBLite consensus disorder prediction 146 346 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 146 169 - -
Chy10g00942 816 ProSiteProfiles Formin homology-2 (FH2) domain profile. 337 781 IPR015425 -
Chy10g00942 816 PANTHER FORMIN-RELATED 7 812 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy10g00942 816 MobiDBLite consensus disorder prediction 209 243 - -
Chy10g00942 816 Coils Coil 694 714 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 770 816 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 770 789 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 392 411 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 607 626 - -
Chy10g00942 816 MobiDBLite consensus disorder prediction 244 319 - -
Chy10g00942 816 Pfam Formin Homology 2 Domain 340 756 IPR015425 -
Chy10g00942 816 PANTHER FORMIN-LIKE PROTEIN 4 7 812 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00968 Chy-Chr3:13215423 Chy10g00942 Chy-Chr10:15003808 2.62E-16 dispersed
Chy10g00942 Chy-Chr10:15003808 Chy11g00235 Chy-Chr11:2211403 4.66E-91 dispersed
Chy10g00942 Chy-Chr10:15003808 Chy12g01523 Chy-Chr12:18995713 8.46E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00942 - - csv:101208197 1251.5