Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00952 ATGAGTGGATGGGATAGGGTTAGACCATCGAGTTCGAGATTTGGGCGTGGTAATTCTGCAATGCACGAGAGGACCGCCTCTACTACAACGGTTCGACTCGGTCGAGTCCAGCCACAGGCACCTGGACATCGCACCATCTTCTGCAATGATCGCGACGCTAATCTTCTTGTCAAATTCAAGGGGAATTCAGTTTCCACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGCTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTCCCGTGCATCCCATTACAAATGTGGTCCCTTTAAGTTTGGTTCTACTCGTCTCACTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTGCAAGATCAAAAGTGGGAGAGCGTTCCGTGGAAAAGGTTGCAGGTTGGAGACATTGTTAGGGTTCGACAAGATGGATTTTTTCCTGCTGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACCGCTAACCTTGATGGCGAGACAAATTTGAAGATTAGGAAAGCTCTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGTGAGCAGCCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAAGCAAACATTACCTCTTAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTGGGGCTGTTATTTTTACTGGCCATGAAACGAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAAAAGAAACTTGACAAGCTTATACTTACGCTGTTTGCTACTCTATTTGTGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACGAAAAGTACTACTACTTAGCTCTTGATAAGGGAGGTGAAAACCAATTCAACCCTCGCAACCGATTCCTGGTTATCATTCTGACCATGTTTACCTTGATTACTCTATACTCAACAATCATTCCTATTTCTCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAATAAGGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCCAGAACTTCCAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAATTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGGATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGCACACAAATCAGCCAATGCTGTTCAAGAAAAGGGATTTAACTTTGATGATCCTAGGCTTATGAGGGGAGCATGGAGAAATGAGCCCAACTCTGACCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTTCCTGAGGGTGATGAATCCCCAGAAAAGATCACATATCAGGCCGCATCACCTGATGAGGCTGCCTTGGTGACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACCCCTACTACAATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATCCAAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGAAAGCGACAGTCTGTGGTGTGTCGTTATTCTGATGGCAGGCTTATCTTGTATTGCAAGGGTGCTGATACCGTTGTATATGAGAGATTGGCTGGTGGAAATGATGATCTGAAGAATATAACTAGGGAACACTTGGAGAAGTTTGGATCTTCCGGTCTGAGAACCCTGTGCCTTGCTTATAGAGATTTGCATCCTGATGTGTATGAAAGCTGGAACGAGAAATTCATTCAAGCTAAATCTTCACTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTGATAAACAATGAGATGAAACAATTTATTATCAGTTCAGAAACGGATGAAATCAGAGAAGTTGAGAACAGGGGTGACCAAGTAGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAAAGGAACTGAAGAAATGCCTTGAGGAAGCACAGCAGTGTTTACATTCTGTCCCTCCACCAAAATTAGCTCTCGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAAATTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTTTGGTGAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCAAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCCCAGTTTCGCTTCCTCACAGATTTACTTCTTGTGCATGGACGATGGTCATATCTTCGAATATGCAAGGTTGTCACATACTTCTTTTACAAGAATCTTACGTTCACTTTAACTCAGTTTTGGTTTACCTTCCAAACTGGGTTTTCTGGTCAAAGATTCTATGACGATTGGTTCCAGTCATTGTATAATGTCATATTCACCGCACTACCTGTAATAATTGTTGGACTCTTTGACAAGGATGTCAGTGCTGCCCTTTCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGTGTTTTTCAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTCTCCATCTACCAATCTCTAGTCTTTTACTATTTTGTAACCGCTTCTAGTTCCAGTAGTCAATCGTCATCAGGCAAGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGGCTGCTTATGATCTGTAATTCAATTACTCGGTGGCACTACATTACCGTTGGGGGAAGCATTTTAGCATGGTTCCTATTTATTTTCTTATATTCCGGTATTATGACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATATTTTTACGTAGCTGTTATCCTCGTTCCCGTTGTTGCACTTCTTTGTGATTTCGCTTACCAAGGCCTTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCCGAAGGTAGAGGTACTGCAGGATTGCTTGAAATTCAAAACCATCTTACACCGGAAGAGGCAAGAAGCTACGCCATGTCTCAACTCCCCCGAGAATTATCAAAGCACACTGGCTTTGCTTTCGACTCACCTGGCTACGAGTCATTTTTTGCGGCACAGCTTGGTATTTATGCCCCACAGAAGGCATGGGATGTTGCTAGGAGAGCCAGTGTGAAGTCAAGACCAAAGATTAGGGAAAAGAAGTAA 3681 41.16 MSGWDRVRPSSSRFGRGNSAMHERTASTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFVMCLIGAIGSGVFVNEKYYYLALDKGGENQFNPRNRFLVIILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEAHKSANAVQEKGFNFDDPRLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLILYCKGADTVVYERLAGGNDDLKNITREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDEIREVENRGDQVELARFIREEVKKELKKCLEEAQQCLHSVPPPKLALVIDGKCLMYALDPSLRVTLLKLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAFFSIYQSLVFYYFVTASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDFAYQGLQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIREKK* 1227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15072143 15085098 - Chy10G181460.1 Chy10g00952 235327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00952 1226 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Chy10g00952 1226 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Chy10g00952 1226 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Chy10g00952 1226 Pfam E1-E2 ATPase 142 375 - -
Chy10g00952 1226 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 24 1222 - -
Chy10g00952 1226 Gene3D - 534 687 IPR023299 GO:0000166
Chy10g00952 1226 Pfam Cation transport ATPase (P-type) 521 614 - -
Chy10g00952 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1132 IPR023298 -
Chy10g00952 1226 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Chy10g00952 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1132 IPR032630 -
Chy10g00952 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1222 - -
Chy10g00952 1226 Gene3D - 688 894 IPR023214 -
Chy10g00952 1226 CDD P-type_ATPase_APLT_Dnf-like 61 1014 - -
Chy10g00952 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 693 IPR023299 GO:0000166
Chy10g00952 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 827 933 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy10g00952 1226 MobiDBLite consensus disorder prediction 12 29 - -
Chy10g00952 1226 Gene3D - 124 289 - -
Chy10g00952 1226 SFLD p-type atpase 404 905 IPR044492 -
Chy10g00952 1226 SFLD Haloacid Dehalogenase 404 905 - -
Chy10g00952 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Chy10g00952 1226 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Chy10g00952 1226 SUPERFAMILY HAD-like 410 897 IPR036412 -
Chy10g00952 1226 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00320 Chy-Chr1:2298426 Chy10g00952 Chy-Chr10:15072143 4.77E-167 dispersed
Chy05g00612 Chy-Chr5:7423633 Chy10g00952 Chy-Chr10:15072143 0 dispersed
Chy08g00572 Chy-Chr8:13285594 Chy10g00952 Chy-Chr10:15072143 2.89E-19 dispersed
Chy10g00952 Chy-Chr10:15072143 Chy12g01464 Chy-Chr12:18585746 7.02E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00952 K14802 - csv:101207069 2394.77