Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00957 ATGGTCCATTGCTCTTCTCCTCACTCTCTTATTTCCATTAATGGCCTTTCCTTTTCTCTTCTAAGTTTCAATATCTCCTCCACCACTCTCCTCCTTTCTCCTCTTCCAATTAATCTCACTCCCACTCCTAAACAATCCAATCATTCCTGTTTTTCTCTTCGTTCTTCTTCTATTCCCACCCGTTCCATTGATTTCTCTGGCTCCCCTTTTCGAATCTCAGATGGGTATTGTTCTAGACTCTCTCTTCTTCGTCCTTGTTCGCCTCCTCATCTACCCAATTGCAGTCATTGCCCTTGGGAGTGTAATCTTATCAAGAAACCGGTTAATTTGCTCCATGGATGCGGTGTTGAGCGGCAGTCTGTGTCGGAGCAAGGTTGTCAAGAGGAGGTTTTGGAGTATTTGGATAGAATTCTTAGATTGGGGTTTGAAGTTGAGTGGGACAAAGATCAGGACCCTTACTTTATTAAGTGTAATGATTGTGAAGCTAACAAAGGTGTTTGTGGGTTCAATTCTTCAGACCCAGATAGAAAATTCATTTGCTATTATACTCGAACTCGATACTCATACCCTAATAGAATCGCGATTCTGTCCTCTGTTTTTGCATTGATGTGCTTGTTATTGGTTATTGCGGTGATGTTGGCTTTTTTCAGGTCCAGATGGTTGAGATCCTTCGCCATTGAAGTTGACCCAACAGCTCAGTTCCTTAGCCGTCATCGTTCACCTAATCTTCTCCCACCTGTTTTCCCTTACGAAGAACTTGAATCCTCAACTAATCGTTTCGACCCAAAGAGGAAACTGGGAGACGGTGGATTTGGGTCTGTTTATTTGGGTCAGCTCAACGATGGTCGATTAGTGGCCGTTAAGTATCTCCACAAGCATCACGCCGCCGCCACTGCCCCCTCCGGCAAGGCTTTCTTCACCAAATCGTTCTGTAACGAAATCTTGATTCTTTCTTCGATTAATCACCCAAATCTCGTGGTGGACTCTGTTTTGGGCGTCGACGGTGAAGTAATCGACGGCGTTGAGGCCATGGCGGAGTTGGCTTTCCGATGCGTTGCGGCGGACAAAGACGACCGCCCTGACGCGAAGGAGATTGTGGAGGAGCTCCGGCGGATTCGGAACTGCACACGTGGAGGGGTCCGGTCGTCGATTTCAAATGTGAGTGCTGACGTGGGTAGAAGTTGA 1185 46.58 MVHCSSPHSLISINGLSFSLLSFNISSTTLLLSPLPINLTPTPKQSNHSCFSLRSSSIPTRSIDFSGSPFRISDGYCSRLSLLRPCSPPHLPNCSHCPWECNLIKKPVNLLHGCGVERQSVSEQGCQEEVLEYLDRILRLGFEVEWDKDQDPYFIKCNDCEANKGVCGFNSSDPDRKFICYYTRTRYSYPNRIAILSSVFALMCLLLVIAVMLAFFRSRWLRSFAIEVDPTAQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHAAATAPSGKAFFTKSFCNEILILSSINHPNLVVDSVLGVDGEVIDGVEAMAELAFRCVAADKDDRPDAKEIVEELRRIRNCTRGGVRSSISNVSADVGRS* 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15119553 15122179 - Chy10G181510.1 Chy10g00957 235332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00957 394 ProSiteProfiles Protein kinase domain profile. 260 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00957 394 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Chy10g00957 394 Gene3D Phosphorylase Kinase; domain 1 232 333 - -
Chy10g00957 394 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 326 380 IPR045274 GO:0007166
Chy10g00957 394 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 326 IPR045274 GO:0007166
Chy10g00957 394 SUPERFAMILY Protein kinase-like (PK-like) 243 326 IPR011009 -
Chy10g00957 394 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 326 380 - -
Chy10g00957 394 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 2 326 - -
Chy10g00957 394 Pfam Wall-associated receptor kinase C-terminal 123 183 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00953 Chy-Chr2:6323184 Chy10g00957 Chy-Chr10:15119553 1.47E-13 dispersed
Chy10g00957 Chy-Chr10:15119553 Chy03g00077 Chy-Chr3:784652 3.19E-22 dispersed
Chy10g00957 Chy-Chr10:15119553 Chy12g01427 Chy-Chr12:18297252 2.32E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71512 PF14380 WAK_assoc 9.70E-09 No_clan Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00957 - - csv:101206111 631.328