Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01025 ATGACGAGGGCTTTTAGAAGACGAACTTTGTATTCAAGGCCTATTGATCGCTTCCGATTCCGAGCATCGGCGGACGGTGCTACGAAATCTGGATTCATCAGAGGTATGAAGCTGAAGGAGATCTTGACTACTTTGTTTATTGGTCTTCCGTTGGTTGTTTTTGTTGTTTTGGTGTTTAGGAATTCAACGGTGGATCTTTTTCTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTGGCCAATAATGGCGGTTCTGAGAGTTCAGGTTCAGAAAACGGTTCCTCTCGACTTTCCAATGGAGACAAACTTATTGGAGGACTTCTAATTCCTGGATTTGATGAAGGATCATGCTTGAGTAGATATCAATCCAGTTTATATCGAAGAACTTCAACTCACAAACCTTCTTCTTACCTCCTCTCGATGCTTAGAGACTACGAAGCACTTCATCAACGGTGTGGCCCCCATACGAAACCATATGATGAAGCAGTAGAGCAACTTAGATCTGGTAATAGTGTTAGTTTGACAGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTGCATTCCTCTATGCCCTCCTTACCAATCGTGTCTTGCTAGTCGATCCAGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAATCTTGGTTGCTCCCAAATGACTTCCCCTTGGTGGATCAATTCAGCAACTTCGATTCAAAATCTCCTAACTGTCATGGAAATATGCTTAAGATGAACACTCTAAATACGTCAATAGAAGCAGTCCCATCCTATCTATACCTACATTTGGCTCATGATTATGATGATCATGACAAGTTGTTTTTCTGTGATCAAGAACAGGCTCTTTTAGGTAGGGTCCCGTGGCTTATACTGAAGACAGACAACTACTTTGTTCCATCTCTCTTCTTGATCCCATCTTTCGAGCACAAATTGAGTAACTTATTCCCGCAAAAAGACACTGTCTTCCATCATCTAGGCCGTTATCTTTTTCACCCATCAAATCATGTTTGGGGTCTAATAACAAGATACTACGAAGCATATCTAGCAAGTGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCAAGAGTGAACCGGGGCCATTCCAACATATAACCGATCAAATTTTAGGCTGTACTCTTAAGGAGAAGCTACTGCCTGAGGTAGACAAGGAAGGCTCCACCTCCGTGCCTCTGGAACGCCCAAGAGTGAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATACTATGAACAATTGAGAACCTTGTACTGGGAATACCCGACTAAAACCGGAGATGTCATTACAGTTCATCAGCCAAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAATAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCAACATTCGGGTATGTGGCTCAAGGGCTCGGCGGATCAAAGCCATGGATTCTTTACAAGGCAGAGAACATGACCACGCCCAATCCACCATGTCGTAGGGCGATGTCAACGGAGCCTTGTTTTCATGCTCCTCCATTCTTTGACTGCAAAGCAAAGAAAGGAATAGATACCGGTGAAGTAGTTCCCCATGTAAGACATTGTGAAGACATGAGCTGGGGGCTTAAGCTTGTTCACCATGAGGATTTATAA 1716 43.12 MTRAFRRRTLYSRPIDRFRFRASADGATKSGFIRGMKLKEILTTLFIGLPLVVFVVLVFRNSTVDLFLGFAEARALERVANNGGSESSGSENGSSRLSNGDKLIGGLLIPGFDEGSCLSRYQSSLYRRTSTHKPSSYLLSMLRDYEALHQRCGPHTKPYDEAVEQLRSGNSVSLTECKYVVWMSYSGLGNKILTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLVDQFSNFDSKSPNCHGNMLKMNTLNTSIEAVPSYLYLHLAHDYDDHDKLFFCDQEQALLGRVPWLILKTDNYFVPSLFLIPSFEHKLSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYEAYLASADERIGIQVRVFKSEPGPFQHITDQILGCTLKEKLLPEVDKEGSTSVPLERPRVKAVLMTSLSSGYYEQLRTLYWEYPTKTGDVITVHQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPNPPCRRAMSTEPCFHAPPFFDCKAKKGIDTGEVVPHVRHCEDMSWGLKLVHHEDL* 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15563589 15566016 - Chy10G182190.1 Chy10g01025 235400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01025 571 Pfam Xyloglucan fucosyltransferase 88 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy10g01025 571 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 6 570 - -
Chy10g01025 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
Chy10g01025 571 Gene3D - 174 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01059 Chy-Chr7:15537493 Chy10g01025 Chy-Chr10:15563589 0 transposed
Chy10g01025 Chy-Chr10:15563589 Chy12g01529 Chy-Chr12:19032616 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01025 K13681 - csv:101216541 1117.83