Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01031 ATGAGCTTTGAACATTCCGGAACTCCCGCCGGTTCACCGTCGCCGGGGAGCACCGGAGGCAGGGGAAATCTATCGTCGTCATCGGCGTCCGGGACGAGTAAGGAGAAGCAAAAGGAGAAAGCAAGAGTGAGTAGGACGTCACTCATATTGTGGCACGCTCATCAGAATGATCCATCTGCTGTTCGTAAGCTTCTGGAGGAGGATCAATCCCTTGTTCATGCTAGAGATTACGACAGCCGCACTCCCCTTCATGTTGCTTCGCTTCATGGTTGGATCGATGTTGCCAAGTGTTTGATTGAACATGGTGCTGATGTTAATGCCCAGGATCGCTGGAAGAACACTCCGCTAGCTGATGCGGAAGGAGCTAAAAAGCATGGCATGATTGAGCTGTTAAACTCGTATGGTGGCCTTTCCTATGGCCAAAATGGAAGCCATTTTGAACCAAAGCCTGTTCCTCCTCCTCTGCCAAATAAATGTGACTGGGAAATTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGGGGTCCTTCGGGGAAATTTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTCAAACGTATTCTTCCATCACTTTCAGATGATAGACTTGTGATTCAGGACTTTCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATTGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCACTTATGCTAATCACTGAATACTTGAGAGGGGGTGATCTTCACCAGTACCTTAAGGATAAAGGTTCGCTCAGTCCTGCAACGGCCATCAATTTTGCGCTGGACATTGCCCGGGGAATGGCTTATCTCCACAACGAACCAAATGTTATAATTCACCGTGATCTAAAACCAAGGAACGTTCTTTTAGTGAATTCTGGTGCGGACCATCTAAAAGTTGGTGATTTCGGTCTAAGCAAGCTCATCAAGGTTCAAAATTCACACGATGTTTACAAAATGACTGGCGAGACCGGGAGTTACCGTTATATGGCTCCTGAGGTTTTTAAACACAGAAAATATGACAAGAAGGTGGATGTTTTTTCTTTTGCAATGATATTATACGAGATGCTTGAGGGAGACCCTCCACTGGCAAATTATGAGCCATATGAAGCTGCTAAGTATGTGGCTGAAGGTCACAGACCGATGTTCCGTGCGAAAGGATACCTTCCTGTTCTGAGAGATATAGTATATTCCGTTCCCAACATTCAACTTTCTTCTGCTCGATTATATGCCCCTGAAGTTGCAAGTGTTCTCAACTAG 1293 45.86 MSFEHSGTPAGSPSPGSTGGRGNLSSSSASGTSKEKQKEKARVSRTSLILWHAHQNDPSAVRKLLEEDQSLVHARDYDSRTPLHVASLHGWIDVAKCLIEHGADVNAQDRWKNTPLADAEGAKKHGMIELLNSYGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPATAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPMFRAKGYLPVLRDIVYSVPNIQLSSARLYAPEVASVLN* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15602821 15607814 - Chy10G182250.1 Chy10g01031 235406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01031 430 Pfam Protein tyrosine and serine/threonine kinase 174 393 IPR001245 GO:0004672|GO:0006468
Chy10g01031 430 SMART ANK_2a 78 107 IPR002110 GO:0005515
Chy10g01031 430 SMART serkin_6 170 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01031 430 SUPERFAMILY Protein kinase-like (PK-like) 167 409 IPR011009 -
Chy10g01031 430 ProSiteProfiles Protein kinase domain profile. 170 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01031 430 ProSitePatterns Protein kinases ATP-binding region signature. 176 197 IPR017441 GO:0005524
Chy10g01031 430 MobiDBLite consensus disorder prediction 1 32 - -
Chy10g01031 430 Gene3D Phosphorylase Kinase; domain 1 155 249 - -
Chy10g01031 430 CDD STKc_MAP3K-like 176 392 - -
Chy10g01031 430 SUPERFAMILY Ankyrin repeat 49 136 IPR036770 -
Chy10g01031 430 Gene3D Transferase(Phosphotransferase) domain 1 250 428 - -
Chy10g01031 430 Gene3D - 21 144 IPR036770 -
Chy10g01031 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Chy10g01031 430 PIRSF ILK 3 412 - -
Chy10g01031 430 MobiDBLite consensus disorder prediction 1 43 - -
Chy10g01031 430 Pfam Ankyrin repeats (3 copies) 45 109 IPR002110 GO:0005515
Chy10g01031 430 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Chy10g01031 430 ProSiteProfiles Ankyrin repeat region circular profile. 78 110 - -
Chy10g01031 430 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 407 - -
Chy10g01031 430 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 28 407 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00198 Chy-Chr2:1354518 Chy10g01031 Chy-Chr10:15602821 1.02E-91 dispersed
Chy10g01031 Chy-Chr10:15602821 Chy12g00047 Chy-Chr12:415459 1.26E-90 dispersed
Chy10g01031 Chy-Chr10:15602821 Chy11g00991 Chy-Chr11:13942694 2.15E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71515 PF07714 PK_Tyr_Ser-Thr 3.10E-56 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01031 - - csv:101215575 781.556