Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01047 ATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCTTGGGTTGGTGATGATCCGTGTGGCGATGGTGATCTGCCTCCCTGGTCTGGGGGACTTCCACAATAACAAGTTGACTGGACCAATTCCTCCTCAGATTGGAAGGTTGAAGCGTCTTCAGATACTTAACTTGAGGTGGAATAAGCTGCAGGATGTCATACCTTCTGAAATAGGTGAACTCAAGAGTTTAACTCATTTATATTTGAGCTTCAATAATTTCAAGGGAGAAATTCCAAGGGAGCTTGCTAGTCTTCCAGAGCTTCGCTACCTACACCTACAACAAAATCGTTTCATTGGACGAATTCCTCCTGAATTGGGCACCCTGCAACATCTTCGCCACTTGGATGTGGGTAACAATCACTTGGTTGGCACCATTAGGGAACTTATACGCGTTGGTGGCTGCTTTCAATCTCTTCGCAACTTGTATCTTAATGATAATTATTTTACTGGGGGCGTTCCTGCTCAACTTGCAAATTTGTCGAACTTGGAAATCTTGTACCTATCACACAACAAGATGTCTGGAATAATTCCTGCTGAATTAGCCCGCATTCCAAGACTGACTTATTTGTTCTTGGACTACAACCAATTTAGTGGGAGAATCTCAGATGCATTTTACAAACATCCATTACTGAAAGAGATGTTCATCGACGGTAATGCTTTCCGGCAAGGTGTAAAGCCAATAGATACCCCTTCCATTCTCAAACCTTCTCTCATCATTCATCACCATCCTCACACTTCACTTCCCATGGCAACGATGACTTCCAAACCTCTCCTCCTCACTCTCCTCTGTTTCTTCACCATCTCCTCTGCTGAGTTCGTTACAGTTTCAGTCAAAGGTGTCACCACCATTGCTCAAACTGACGACGATTTTATCTGTGCTACTTTAGATTGGTGGCCTCCTAATAAATGCGATTATGGCCAATGCCCATGGGGAAAAGCTGGCATTCCTAATTTGGATCTTCAGAATATTATCTTGGCCGAAGCAATCAAGGAGTTCAATCCTTTGAGAATCCGAGTTGGAGGGTCACTTCAAGATCAAATCATTTACAGAGTTGGAAAGTCATATAAGAAGTGTCCTGAAATGAGGAAACAAAGTGATGGTTTGTTTGGATTCAGCAAAGGTTGTTTAACTATGCAACGATGGGATGAACTTAACGATTTGTTCAACAAAACATCAGCTCGTATTACATTTGGTTTAAATGCTTTAAAGGGTAAAAAACCAGCAAATGATGGAACTATCAATTGGGTTGGTGATTGGGATTCTCAAAATGCTCGTGATTTAATTCGTTACACTGCCTCTAAAGGATACAAAATCGATTCTTATGAACTGGGGAACGAGCTTTCTGCTACTGGAGTTTCGGCTAGGCTCGAGCCAGACCAATATGGTAAAGACTTGACAGTAATGAGGAAAATAGTTGAAGAAGTGTATCCTGATCCCAACAACAGACCCAAAATCTTGGGACCAGCTGGGTTCTTTGACAAAGAATGGTTCAGAGTCTTTCTTCAAAACACTGCACCAAATGTTGTTGATGGAGTCACTCACCACATCTACAATCTTGGAGCAGGTGTTGATCCTACACTTATAGATAAGGTTCAAGACCCTTATTATTTGGACCAAATTGCTCAAACATTTAAGGAAGCCAAAGAAGTTTCAGAGAGTTTTGGCGCATGGTCTAAGCCTTGGATTGGTGAATCTGGTGGTGCTTATAACAGTGGTGGCAAAACTGTTTCTCATACTTTTGCTGATGGATTTTGGTATTTGGATAATTTGGGGATGACTGCATCATTTGATCATCAGGTTTATTGTAGACAAGCCTTGATTGGTGGAAATTATGCTTTGCTTAATACCACCACTTTCATCCCTAACCCAGATTACTATAGTGCTCTACTATGGCATAGATTAATGGGAAAGAAGGTCCTGGCAGCATCCCATGACAGTTCTCCATACCTTCGTGTTTATTCACATTGTACCAAAAACGACGAAGGTGTAACTGTTCTTCTAATCAACCTGTCAAATTCGACAACGCATGATGTGAAGATTGTAAACGACAGAAACATTTACCCAAATTTCGTAGGCAAGAAATTAAAAGCAAGAGAAGAGTATCATTTGACACCCAAAGATGGTGATATTCAAAGCGATATTATGCTTTTAAATGGAACTCCTCTTCAACTTACACCAATGTTGGAAATTCCCAAAATGAAGCCGAAGCTTGTCGATCCCACTTCCGCTGTATCGGTTGCCCCTCATTCTTACGTCTTCGTCTCCATCAAAGACTTCAAAGCTTCTGCTTGCGCCTAA 2337 41.55 MRSRLLLAGEWCILGLVMIRVAMVICLPGLGDFHNNKLTGPIPPQIGRLKRLQILNLRWNKLQDVIPSEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHLQQNRFIGRIPPELGTLQHLRHLDVGNNHLVGTIRELIRVGGCFQSLRNLYLNDNYFTGGVPAQLANLSNLEILYLSHNKMSGIIPAELARIPRLTYLFLDYNQFSGRISDAFYKHPLLKEMFIDGNAFRQGVKPIDTPSILKPSLIIHHHPHTSLPMATMTSKPLLLTLLCFFTISSAEFVTVSVKGVTTIAQTDDDFICATLDWWPPNKCDYGQCPWGKAGIPNLDLQNIILAEAIKEFNPLRIRVGGSLQDQIIYRVGKSYKKCPEMRKQSDGLFGFSKGCLTMQRWDELNDLFNKTSARITFGLNALKGKKPANDGTINWVGDWDSQNARDLIRYTASKGYKIDSYELGNELSATGVSARLEPDQYGKDLTVMRKIVEEVYPDPNNRPKILGPAGFFDKEWFRVFLQNTAPNVVDGVTHHIYNLGAGVDPTLIDKVQDPYYLDQIAQTFKEAKEVSESFGAWSKPWIGESGGAYNSGGKTVSHTFADGFWYLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHDSSPYLRVYSHCTKNDEGVTVLLINLSNSTTHDVKIVNDRNIYPNFVGKKLKAREEYHLTPKDGDIQSDIMLLNGTPLQLTPMLEIPKMKPKLVDPTSAVSVAPHSYVFVSIKDFKASACA* 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15692996 15699845 - Chy10G182410.1 Chy10g01047 235422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01047 778 SUPERFAMILY L domain-like 33 235 - -
Chy10g01047 778 Gene3D Glycosidases 326 646 - -
Chy10g01047 778 Gene3D Ribonuclease Inhibitor 31 143 IPR032675 -
Chy10g01047 778 Gene3D Ribonuclease Inhibitor 144 250 IPR032675 -
Chy10g01047 778 SMART LRR_typ_2 97 121 IPR003591 -
Chy10g01047 778 SMART LRR_typ_2 49 73 IPR003591 -
Chy10g01047 778 SMART LRR_typ_2 172 195 IPR003591 -
Chy10g01047 778 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Chy10g01047 778 Pfam Leucine rich repeat 51 110 IPR001611 GO:0005515
Chy10g01047 778 PANTHER HEPARANASE-RELATED 275 778 - -
Chy10g01047 778 Pfam Glycosyl hydrolase family 79, N-terminal domain 286 604 IPR005199 GO:0016020|GO:0016798
Chy10g01047 778 SUPERFAMILY (Trans)glycosidases 299 648 IPR017853 -
Chy10g01047 778 PANTHER OS07G0598400 PROTEIN 275 778 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01272 Chy-Chr5:17033789 Chy10g01047 Chy-Chr10:15692996 5.99E-170 dispersed
Chy09g00557 Chy-Chr9:5971409 Chy10g01047 Chy-Chr10:15692996 2.35E-159 dispersed
Chy10g01047 Chy-Chr10:15692996 Chy02g00598 Chy-Chr2:3630906 3.54E-07 dispersed
Chy09g00673 Chy-Chr9:8792127 Chy10g01047 Chy-Chr10:15692996 5.98E-120 transposed
Chy10g01047 Chy-Chr10:15692996 Chy12g01517 Chy-Chr12:18962571 0 wgd
Chy10g01047 Chy-Chr10:15692996 Chy02g02463 Chy-Chr2:28212025 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01047 K07964 - csv:101214214 1057.74