Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01053 ATGTCGTCCGCCGAGAGGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTTGCTGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTGGCTAAACTAGATGTTGAGCTAACAGTGGAAGAGAGAAACTTGCTTTCTGTTGGGTACAAAAATGTTATAGGTGCTAGGCGAGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTCATTAAGAGTTACCGTCAGAAGGTAGAGGAGGAGCTTTCCAAGATCTGTATCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAACCTCTTCAGAAGCATCGGTTTTCTACTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAAAGAAAGGAGGCAGCTGACCAGTCATTGAAGGGATATGAGGCATGTTTTATTCTCAATACTGCTGCGAGCACCGCAAATACCGAACTTCCATCAACCCACCCAATCCGTCTTGGCCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCCCCTGAAAGGGCTTGCCACTTAGCTAAACAAGCTTTTGACGAGGCAATTGCTGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGATAACCTCACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGATAACGTCAAAGGTGAGGATTCCAAACCGGCAGCACCAGCACCAGCCCCTGAGGTTGAAGACACATTTGAGAACTCTTCTAGGAATTAG 843 44.37 MSSAERERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICIDILTIIDKHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYEACFILNTAASTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNVKGEDSKPAAPAPAPEVEDTFENSSRN* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15730984 15733990 + Chy10G182470.1 Chy10g01053 235428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01053 280 Pfam 14-3-3 protein 14 242 IPR023410 -
Chy10g01053 280 PANTHER 14-3-3 PROTEIN 4 264 IPR000308 -
Chy10g01053 280 Coils Coil 202 222 - -
Chy10g01053 280 PIRSF 14-3-3 2 254 IPR000308 -
Chy10g01053 280 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Chy10g01053 280 Gene3D - 1 255 IPR036815 -
Chy10g01053 280 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Chy10g01053 280 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Chy10g01053 280 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Chy10g01053 280 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Chy10g01053 280 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Chy10g01053 280 MobiDBLite consensus disorder prediction 244 280 - -
Chy10g01053 280 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Chy10g01053 280 PANTHER BNAC03G57490D PROTEIN 4 264 - -
Chy10g01053 280 Coils Coil 14 34 - -
Chy10g01053 280 SUPERFAMILY 14-3-3 protein 7 244 IPR036815 -
Chy10g01053 280 SMART 1433_4 8 256 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00337 Chy-Chr1:2449352 Chy10g01053 Chy-Chr10:15730984 3.10E-138 dispersed
Chy03g00712 Chy-Chr3:9626076 Chy10g01053 Chy-Chr10:15730984 1.68E-07 dispersed
Chy03g01354 Chy-Chr3:16443954 Chy10g01053 Chy-Chr10:15730984 4.41E-125 dispersed
Chy07g00921 Chy-Chr7:13090532 Chy10g01053 Chy-Chr10:15730984 1.10E-127 dispersed
Chy10g01053 Chy-Chr10:15730984 Chy04g00255 Chy-Chr4:2267948 1.34E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01053 - K06630 csv:101221275 476.478