Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01056 ATGACTTCCATCTCAAACATTATTCACTCTCCAATTCATTCACATCGGTTACCTTCCTTTCGGTTGTTTCCCAATAGAACATTTCCCGCCAACCCTTTTGTTCTCAGACGTCGATCACTTGCTTCGCCTTTGAGCTCCCCGTTGACGGAGAATCCAACTGTTTCGCCGTCGGTGGAACTATCTCACAAGGCTATTGGCCTTTTAAGTTCTAGACAACCTTTAAAGTCTCGAAGTGTTGTTCGTTTGCCGGTGGTGAAGGCGGCTGCAGCTGATGCTGATGGAGCTTCCGATGGGTTGACTAGCTCTTCCGAGAGCTTTGGTGCAAGATTTCCAGCACTTATTACTGGATTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAACAAAAAAGTTTACAATTATTTTCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGTATACTGTCTCGTTTCTTGGGCTGTAGGTCTGCCAAAACGTGCCCCGATCGATAAGGAGCTCTTGCTATTATTGACTCCAGTTTCGCTATGTCATGCACTTGGACATGTGATGTCAAATGTTTCGTTTGCAGCTGTTGCTGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCGGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTTAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCTTTCAATTGGATTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTTACCTATAGAAGTATATATTCGAAGAAAGCCATGACAGGAATGGACAGTACAAACGTGTATGCATACACCTCAATAATTGCTCTTTTGTTTTGCATTCCTCCTGCAGTAATGATTGAGGGACCGCAATTGCTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTTTACATAAGTTCTTGTCTGATCTTTTCTGGATCGGCATGTTTTATCATTTATACAATCAGCTTGCCGCTAACACTCTCGAACGTGTTGCACCCTTAACGCATGCTGTAGGAAACGTATTGAAGCGAGTTTTCGTGATTGGATTCTCCATTGTTGTTTTTGGCAACAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAGCAAAAACGGATAGACACTGTTTATAAACGAGGCTGGAGAATTCGCCCGAGTTGGTTGCTTGATCACTCACCAGAGGAGTCTACTGTACACCCACAAATTAACAGACTCCAGAGAATGGAAAAAAGAGATGATGCGAACTATTGTTTGTGTAGAGATGGGGTTGGCCAATCAGCCCTTCAAAAGGCACTGGACTATGCCTGTGGAGCTGGAGCTGACTGTTCTGCAATCCTCTCCAGTGGCACTTGTTTTCAGCCCAACACTGTTAAAGATCACTGCAATTACGCTGTCAACAGTTATTTCCAGCGAAAGGGGCAAGTGCAAGGAAGTTGTGACTTCAGCGGTGCCGCCACGCCCAGCGTTACCCTCACTGCCTCTGTGCCTTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCAACGAACGGTGGTGGAACTACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCGGGAATGACACCGACGGTGTTCGGTAACGGAATCAGCCCAAGTGGGAGCGGGAGCGGGTTCAACGACGGTAGCGGCGGCGTGGGTTCCAATGAAAATAGGAACTTGCTTTTGGCAGTGGGGCAAAGTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA 1875 45.76 MTSISNIIHSPIHSHRLPSFRLFPNRTFPANPFVLRRRSLASPLSSPLTENPTVSPSVELSHKAIGLLSSRQPLKSRSVVRLPVVKAAAADADGASDGLTSSSESFGARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWIGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLHKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRIDTVYKRGWRIRPSWLLDHSPEESTVHPQINRLQRMEKRDDANYCLCRDGVGQSALQKALDYACGAGADCSAILSSGTCFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFSGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNGGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGGVGSNENRNLLLAVGQSLWLSVLFLWG* 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15739628 15748395 + Chy10G182500.1 Chy10g01056 235431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01056 624 MobiDBLite consensus disorder prediction 542 575 - -
Chy10g01056 624 PANTHER SOLUTE CARRIER FAMILY 35 56 409 - -
Chy10g01056 624 Pfam X8 domain 456 526 IPR012946 -
Chy10g01056 624 Pfam Triose-phosphate Transporter family 115 401 IPR004853 -
Chy10g01056 624 Gene3D - 451 541 - -
Chy10g01056 624 SUPERFAMILY Multidrug resistance efflux transporter EmrE 330 402 - -
Chy10g01056 624 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 56 409 - -
Chy10g01056 624 SUPERFAMILY Multidrug resistance efflux transporter EmrE 157 250 - -
Chy10g01056 624 SMART X8_cls 455 541 IPR012946 -
Chy10g01056 624 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 113 411 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00710 Chy-Chr3:9608861 Chy10g01056 Chy-Chr10:15739628 5.69E-43 dispersed
Chy06g01802 Chy-Chr6:21686807 Chy10g01056 Chy-Chr10:15739628 5.72E-75 dispersed
Chy09g00348 Chy-Chr9:3036670 Chy10g01056 Chy-Chr10:15739628 8.82E-62 dispersed
Chy10g01056 Chy-Chr10:15739628 Chy12g01264 Chy-Chr12:17224495 1.13E-57 dispersed
Chy01g01183 Chy-Chr1:13835967 Chy10g01056 Chy-Chr10:15739628 7.64E-23 transposed
Chy02g00274 Chy-Chr2:1782765 Chy10g01056 Chy-Chr10:15739628 3.79E-158 transposed
Chy10g01056 Chy-Chr10:15739628 Chy12g01504 Chy-Chr12:18848579 6.09E-35 wgd
Chy10g01056 Chy-Chr10:15739628 Chy02g02449 Chy-Chr2:28116829 1.54E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01056 K15283 - csv:101221040 759.214