Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01064 ATGGCTCTATGTGGGGATCATAAAGATAGAGAAGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTGTTTTCTATCGCGTTATCTGGTGGTTCTCTGATTAGCTTAATGGGAAAGCTCTGTGAAGCTCCTTATAACAAGACTGTCGACTGGGCCAAGTGGTTTATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATACCGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTTCCAATTGTTCCCAGCCATGTGCACTCGATCAATGATTCAGTGTCAGCTGAGGAAGCTGCTGATGAGTACAAGTTCGTCATTCGACAATTAGTTAAATCCCGTATCGTAAGTGTGTCCGATGTGAGTGATAGCCCCAAGTTTGACCTCATACTACTTGGAATGGGCTCTGATGGTCACGTTGCCTCATTATTCCCTGATCACTCGGTGCTCGAGGAGAAAGATGAATGGGTTACCTTCATTACTGATTCTCCAAAACCTCCTCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCAATTGTTGTGACAGGTGAAAGCAAAGCAGAGACCGTACATTTAGCCATCGACGACGTAGGACCAGACTGCCCACTCCTACCTGCAAGGTTGGTACAGCCAAGAAAAGGAAAACTGACATGGTTTTTGGATAACAACGCTGCTTCAAAACTCGACAATTACCAATTTTCTGAGTAG 798 44.11 MALCGDHKDREVRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSLISLMGKLCEAPYNKTVDWAKWFIFWADERVVAKSHTDSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVIRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPDHSVLEEKDEWVTFITDSPKPPPERITFTLPVINSASNVAIVVTGESKAETVHLAIDDVGPDCPLLPARLVQPRKGKLTWFLDNNAASKLDNYQFSE* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15805247 15806890 + Chy10G182580.1 Chy10g01064 235439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01064 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 11 260 IPR037171 -
Chy10g01064 265 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 265 IPR039104 -
Chy10g01064 265 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 265 - -
Chy10g01064 265 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 248 IPR006148 GO:0005975
Chy10g01064 265 TIGRFAM pgl: 6-phosphogluconolactonase 14 258 IPR005900 GO:0005975|GO:0006098|GO:0017057
Chy10g01064 265 Gene3D - 7 261 - -
Chy10g01064 265 Coils Coil 18 38 - -
Chy10g01064 265 CDD 6PGL 19 250 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01460 Chy-Chr9:16085542 Chy10g01064 Chy-Chr10:15805247 2.55E-95 dispersed
Chy09g01461 Chy-Chr9:16088927 Chy10g01064 Chy-Chr10:15805247 3.25E-32 dispersed
Chy09g01462 Chy-Chr9:16089288 Chy10g01064 Chy-Chr10:15805247 3.17E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01064 K01057 - csv:101210739 500.745