Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy10g01067 | ATGGGTAAAACCGGAGCAAAATTGCCAAGTTTCTGCCTGAACCGGATACGGCCTCATGTTAGAGTTCCTATTCAATCCAAACCCGACTTTGTTTCGGTGAAAACCGGTCCGAACAAGAAGATTGATGATTGTTTAGATGAGAAGAATGATCATGTTGGAGTTGATCAAAGTAATAAGGCAGTGATGGGAATTGGAAGGAAGATCATGATTGTTGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCATACTGTCCAAATTCAAGACAACATTCTTCTTCTCCATGTCACTAAACCTTCATCTAAAGGGGAAGGACCCAATAAGGAGACAGCACCAAGAGCATATGAATTGGTTCATTCAATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGTAGTAGTGGAAGGAGGGAAGGAGAAGGGGGCAGTGATAGTGGAAGAAGCGAGGAAGAGAGGGGCGTCGTTGTTGGTATTGGGGCAGAAGAAAAGGTCGACGACATGGCGGCTTTTGATGGTGTGGGCAGGGCAGCGGTGGGGCGGTGGAGGTGGGAGCAGTGGGGGCGTGGTGGAGTATTGTATACAGAATGCGAGTTGTATGGCAATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGAGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 714 | 46.08 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDFVSVKTGPNKKIDDCLDEKNDHVGVDQSNKAVMGIGRKIMIVVDSTIEAEGALHWALSHTVQIQDNILLLHVTKPSSKGEGPNKETAPRAYELVHSMRTLCQLKRPEVETEVVVVEGGKEKGAVIVEEARKRGASLLVLGQKKRSTTWRLLMVWAGQRWGGGGGSSGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA* | 238 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 15828094 | 15829056 | + | Chy10G182610.1 | Chy10g01067 | 235442 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy10g01067 | 237 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 66 | 217 | - | - | |
| Chy10g01067 | 237 | Pfam | Universal stress protein family | 66 | 214 | IPR006016 | - | |
| Chy10g01067 | 237 | Gene3D | HUPs | 51 | 217 | IPR014729 | - | |
| Chy10g01067 | 237 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 237 | - | - | |
| Chy10g01067 | 237 | CDD | USP_Like | 67 | 213 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g02405 | Chy-Chr2:27799693 | Chy10g01067 | Chy-Chr10:15828094 | 3.62E-19 | dispersed | |
| Chy06g00423 | Chy-Chr6:2873841 | Chy10g01067 | Chy-Chr10:15828094 | 2.09E-19 | dispersed | |
| Chy07g00648 | Chy-Chr7:6201064 | Chy10g01067 | Chy-Chr10:15828094 | 6.35E-25 | transposed | |
| Chy12g01456 | Chy-Chr12:18545663 | Chy10g01067 | Chy-Chr10:15828094 | 2.66E-08 | transposed | |
| Chy10g01067 | Chy-Chr10:15828094 | Chy12g01478 | Chy-Chr12:18683545 | 1.38E-48 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy10g01067 | - | - | csv:101211142 | 445.662 |