Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01075 ATGGCTCTCAAATCTCTTCTAAAACCCAAATCCTCAAGTACAAAATTCTTCCTTTCTTCTTTGTCATTCTCCTCCTCCTGCAAACAACAACCCATCTTCTCATTCCCTTCCCAGTCCCCACCTTCTCCTAAAAAACTCCCTTTCACTCACTCTGTTCATGGCGTTACGCTGCAAGATCCCTACCACTGGATGTCCAACACCCACGACCCTGATTTCGCTGACTATCTCCGTCAAGAAAACCTGTATGCTGAAGCATTCATGGCTGACACTCAGGTTCTACAGCGGCAGCTCTTCTCCGAGATGACGAGTCGAATTCCCGCCAAGGTTTCCACTCCCCCTGAGCCTTGGGGATCCTGGTTTTACTACCAATACATTCCGGATGGGAAGGAATACCCAGTTCTATGCCGTAGGTTACAGAATCAGAAAAGCAGCTGGTTTAAGAAAATTTTAAATTTTGGTAAAGGGAATTCTGGGAAGGAAGAACAAGTATTGCTTGATTGGAATGAAATTGCTAAACAACACGGCTATGTTCACGTGGGAACGTGTCGTATTTCACCAGACCATAACTTTCTAGCATATACAGTTGATATTACTGGCAATGAACACTTCATGCTTCAGATTAAAGACCTGAGAAATGGACTGATAATTCCCAAGTTACAGAAGGAGGGAGTTGTAAGTTTGGCTTGGGCGGAAGAAGGCAGGGTGCTTTTCTATACACAAGCAGATGAGAATCAGCGACCTTACAGGCAAATTTTTGTCAACGTTTATATCATAGATGCTAACAACTCATTAGGTGGATTGCTAAAAATACATGAACGCATTCCTGGTATTCAATACTTTTTGGAACATCATCATGGTTTCTTTTATATCCTAACAAATGCTCCTCTTGAAAAGAATGGGGATTGTTCGGAAGAAGATTATTATGTAGCTCGATGTCGAGTTGAAGATATTAAGTCAGCAGATTGGCAGGATATCGTCCTTCAGAGTGAAGATTTCAGCATACAGGACATGGATATTTTCAGTGGACATCTTGTGCTTTTTGTCAATAAGAATGGTGTTTCTATGTTATGTTCAATCAATTTGCCTTTAGATGCTGATCATAACCATCACTTGGAGATTGACAAACTTGACCCATGGTTTTTCCCTCTTCCCTCAAATTCCTGCAGCGTAGCTCCAGGATCAAACCATGACTTCATGAGCTCATTATACCGTGTGGTGCTCTCATCACCAGTGATGCCAGATTTAATTGTTGACTATGACATGTCCAAACGGATCTTTTCAATCATTCAGCAAGAGGAAGTAAAAGTCCAGCATGATGTTGAACTTAAAACAAATCTACCAGATACGTTGGATGCTGAGGAAGTTTCAGACACTCAAAGCAAAAGAGAAAATTTCCAGAATTGTGAATCCCAAAATTGGAAGGACTTTTCGGAGGCATACTTTTGCGAAAGGATAGAAGTTAAATCACATGACGGCATCAGAATACCCTTGACCATATTGTATTCCCCAATGACTTTTCAAAAAGGACAGTCACCCGGAATTCTACAAGGGTATGGAGCATATGGTGAAATCCTGGATAAAAGTTGGTGTCCTTATCGCCTGAGTTTACTTGACCGCGGTTTTGTGCTGGCGTTTGCAGATGTCAGGGGAGGAGGTGGTTGTGGTGATTCTTCATGGCATATATGTGGGAGTGGACTTGAGAAACCAAACTCAATACACGACTTCATCTCTTGTGCAAATTTTCTCATTAATAATGGTTATGTTCATAAGGATCGACTGGGTTCCATTGGATACAGTGCTGGAGGTCTTCTAGTTGGGGCTGCTATCAACATGCATCCCGATCTGTTTCGTGCGGCCGTTTTAAAGGTTCCATTTCTCGACATATGTAACACCCTACTGGATCCCAGTTTACCTCTCACCGTTCTGGATTATGAAGAATTCGGAAACCCACAAATACAAAAGCAATTCGAGTCTATTTTAAGCTATTCTCCTTACGACAATATATCCAAGGGAAGCTGTTATCCTTCAATGCTCGTCACAGCGTCATTCCATGATGCAAGGGTTGGAGTATGGGAAGCTGCTAAGTGGGTGGCAAAAATTCGAGACACTACGTGCTCTCGCTGTTCAACTTCTGCAATTTTAAAGACCAATATGCTTGGAGGACATTTTGGTGAAGGTGGTCTCTATGGTGGATGTGAAGAGATGGCTTATGAGGGGTATTATTTGACATTACATAACTTGATGACCTGCGCCTTTCATGCTTGGCAACCAAGTCAAGCCAAGATTTCAGAAGAGAAATGCTTTGCTGCGGCCACCATGGCGGCCTCTGGCCCCGATGGAGACACTGCAGCGTTGGATGGGTCAGCATTTCCATCGTTGAGGCCAACACTAGCACTAGCACATACTTATAGGCTGAAGAAATGA 2424 42.82 MALKSLLKPKSSSTKFFLSSLSFSSSCKQQPIFSFPSQSPPSPKKLPFTHSVHGVTLQDPYHWMSNTHDPDFADYLRQENLYAEAFMADTQVLQRQLFSEMTSRIPAKVSTPPEPWGSWFYYQYIPDGKEYPVLCRRLQNQKSSWFKKILNFGKGNSGKEEQVLLDWNEIAKQHGYVHVGTCRISPDHNFLAYTVDITGNEHFMLQIKDLRNGLIIPKLQKEGVVSLAWAEEGRVLFYTQADENQRPYRQIFVNVYIIDANNSLGGLLKIHERIPGIQYFLEHHHGFFYILTNAPLEKNGDCSEEDYYVARCRVEDIKSADWQDIVLQSEDFSIQDMDIFSGHLVLFVNKNGVSMLCSINLPLDADHNHHLEIDKLDPWFFPLPSNSCSVAPGSNHDFMSSLYRVVLSSPVMPDLIVDYDMSKRIFSIIQQEEVKVQHDVELKTNLPDTLDAEEVSDTQSKRENFQNCESQNWKDFSEAYFCERIEVKSHDGIRIPLTILYSPMTFQKGQSPGILQGYGAYGEILDKSWCPYRLSLLDRGFVLAFADVRGGGGCGDSSWHICGSGLEKPNSIHDFISCANFLINNGYVHKDRLGSIGYSAGGLLVGAAINMHPDLFRAAVLKVPFLDICNTLLDPSLPLTVLDYEEFGNPQIQKQFESILSYSPYDNISKGSCYPSMLVTASFHDARVGVWEAAKWVAKIRDTTCSRCSTSAILKTNMLGGHFGEGGLYGGCEEMAYEGYYLTLHNLMTCAFHAWQPSQAKISEEKCFAAATMAASGPDGDTAALDGSAFPSLRPTLALAHTYRLKK* 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15863118 15868793 + Chy10G182690.1 Chy10g01075 235450

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01075 807 Gene3D - 110 253 - -
Chy10g01075 807 Pfam Prolyl oligopeptidase family 533 729 IPR001375 GO:0006508|GO:0008236
Chy10g01075 807 Gene3D alpha/beta hydrolase 434 738 IPR029058 -
Chy10g01075 807 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 255 742 - -
Chy10g01075 807 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 24 250 - -
Chy10g01075 807 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Chy10g01075 807 SUPERFAMILY Peptidase/esterase 'gauge' domain 36 434 - -
Chy10g01075 807 SUPERFAMILY alpha/beta-Hydrolases 482 702 IPR029058 -
Chy10g01075 807 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 24 250 - -
Chy10g01075 807 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 255 742 - -
Chy10g01075 807 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 40 248 IPR023302 GO:0004252
Chy10g01075 807 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 254 424 IPR023302 GO:0004252
Chy10g01075 807 Gene3D - 255 433 - -
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 538 562 IPR002470 GO:0004252|GO:0006508
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 597 617 IPR002470 GO:0004252|GO:0006508
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 674 696 IPR002470 GO:0004252|GO:0006508
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 512 530 IPR002470 GO:0004252|GO:0006508
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 567 586 IPR002470 GO:0004252|GO:0006508
Chy10g01075 807 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 655 670 IPR002470 GO:0004252|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01075 - - - csv:101218436 1394.02
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01232 Chy-Chr5:16734729 Chy10g01075 Chy-Chr10:15863118 2.63E-164 dispersed
Chy10g00668 Chy-Chr10:13141949 Chy10g01075 Chy-Chr10:15863118 5.43E-91 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g992 . . . . . . Bma14g01669 . Cmo04g01649 . . . Car04g01626 . . . Cpe01g01398 Bhi07g01448 . . . . . . . . . . . . . . . . . . Csa05g02531 Chy10g01075 Cme10g01398 . Blo11g00797 Bda07g01492 . Bpe11g01659 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007009 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy10g01075 Chy_Chr10 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0