Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01083 ATGGATATTGGTGACAGAGATAAATTTAGACTAGAAAGTAGCATAGAGGACACTATTAACTGTTCGAATAGCATGTCATCGGATTGGCAATTTGGCGAGACAACTCTCTCGACTATGCCGACTGGTTTGGTTTTGCCAGGGAATGTGGATGTAGTTAGGAATCAGGATATGGTTGCTTGTTCTTCTTCCACTGCTTCTATGGTAGAGTCATTTAACTCCACTATCTGGGAACAATCAGCTCATTGTCAAAACTTGGGAATTAGCAACATTCAAGGCCATAACATCTCCAATACTTCAAATTTTATAGGAATTAGTAAGGCCAGTGGCTGTCCAGTTTCTTCAAGCAGTGACATTGATAGAACACTTGACATCAGCTGGAACCTATCCCATAATATGTTAAAAGGGGGTGTTTACCTACCTAATTTCCCGGGCATGCTCCCGCCAAGTTTATCTCAACTTCCAGCTGATTCTTCATTCATTGAGCGTGCAGCCAGGCTTTCCTGCTTTAGTGGTGGGAATTTTGGTGATATTGTTGGACATTTCAACGTTCCTGACCCTGTGGGTGTTTTTTCCAGAGGCATGGGAGTAATCCCTGAGAGATGGGATGAAATTCCACGAAACGGGTTAGGTTTGGCATCTGGAACAGAAGGACAATCTCAAAGAAACGTGGTTAACAGTGAATCTTCCAAGCCTGTTTGTTTGACTAATGAACATGGAGCTACTGAAAGGGATTCACCTAAAAATGGAAGCCCTTTGAAGTTGGATGTTCGTGGTAAATTTGCTGTTGATGGTTCTGCTAATGAATCTGATGAAGCTGAGTGTAGCGGGGGTGATGGTTTGGGTGAACCATGCACGTTAGAGGCCACGGGTAAGGAACTTTCTACCAAGGGTCTCGGCACGAGGAAAAGGAAAAGAAGTGGACAGAAGACTGAACTTGATCAAGCGAATGGACCTCTTCAACAAACTACTGTTTCACCTAAGGATGATGCTGAAACTCAGCGAAAAAGAGATCAAAATCCGAATTCCACTGCAAACAAGGGTACAGGAAAACATGGTAAACAGGCATCTCAACCTTCTGATCCTCCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGGGGTCAGGCAACAAACAGCCATAGTCTTGCAGAGAGGGTAAGGAGGGAGAAGATCAGTGAGAGGATGAAGTTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTTACTGGAAAGGCAGTGATGCTCGATGAAATCATCAACTATGTCCAATCACTGCAACGACAAGTTGAGTTTTTATCAATGAAACTTGCTACCGTAAATCCAAGGTTGGATATTAACATCGATGGAGTTGTAGCCAAAGATATTCTTCAATCACGAGTTGGTCCATTGTCGACATTGGGATTTTCTTCGCATATGCCCGTTGCTTGTCCTCCACCTCATATTTCTCATCATGAACTTATCCCAAGCAATTTTCCTGCCATAGGGAGCTCTGAGATGTTAAGAAGCACAATGAATTCTCATATGACTCCAAGGTCTGGTGGATTTAAGAATCCTTCTCAGATAAAGAATGTGTGGGAAGGTGAACTCCAAAACCTTGTGCAGATGAGCTTTGGGATACCCACTCCCCCAAATTGTTTAGAAGTTGAAGGTAAAATAACAAAAAAACTACTCATGACATAA 1680 42.74 MDIGDRDKFRLESSIEDTINCSNSMSSDWQFGETTLSTMPTGLVLPGNVDVVRNQDMVACSSSTASMVESFNSTIWEQSAHCQNLGISNIQGHNISNTSNFIGISKASGCPVSSSSDIDRTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFGDIVGHFNVPDPVGVFSRGMGVIPERWDEIPRNGLGLASGTEGQSQRNVVNSESSKPVCLTNEHGATERDSPKNGSPLKLDVRGKFAVDGSANESDEAECSGGDGLGEPCTLEATGKELSTKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSHMPVACPPPHISHHELIPSNFPAIGSSEMLRSTMNSHMTPRSGGFKNPSQIKNVWEGELQNLVQMSFGIPTPPNCLEVEGKITKKLLMT* 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15909181 15911528 - Chy10G182770.1 Chy10g01083 235458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01083 559 MobiDBLite consensus disorder prediction 212 235 - -
Chy10g01083 559 Gene3D - 372 445 IPR036638 GO:0046983
Chy10g01083 559 SMART finulus 381 431 IPR011598 GO:0046983
Chy10g01083 559 CDD bHLH_AtBPE_like 365 450 - -
Chy10g01083 559 Pfam Helix-loop-helix DNA-binding domain 378 426 IPR011598 GO:0046983
Chy10g01083 559 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 375 425 IPR011598 GO:0046983
Chy10g01083 559 MobiDBLite consensus disorder prediction 208 363 - -
Chy10g01083 559 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 443 IPR036638 GO:0046983
Chy10g01083 559 MobiDBLite consensus disorder prediction 337 355 - -
Chy10g01083 559 MobiDBLite consensus disorder prediction 296 310 - -
Chy10g01083 559 PANTHER TRANSCRIPTION FACTOR BHLH49 17 554 - -
Chy10g01083 559 MobiDBLite consensus disorder prediction 311 327 - -
Chy10g01083 559 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 17 554 IPR024097 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01755 Chy-Chr4:23915884 Chy10g01083 Chy-Chr10:15909181 7.46E-44 dispersed
Chy09g00423 Chy-Chr9:3739941 Chy10g01083 Chy-Chr10:15909181 5.07E-144 dispersed
Chy10g01083 Chy-Chr10:15909181 Chy11g00377 Chy-Chr11:3494250 1.10E-40 dispersed
Chy10g01083 Chy-Chr10:15909181 Chy07g00212 Chy-Chr7:1716195 1.61E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18621 PF00010 HLH 6.30E-06 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01083 - - csv:101209589 1086.63