Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01084 ATGGCGTCTTCTCCCACTCCCATCTCTCCACTATCTTTTACCAATCCGATATCAACATCACGAACAAAACCAAAACCATTACCATTACCATTTCCAAACAAACCGCCGTCTTCATTGCCTCCTGCGTTGAACCCCAACCCCAAACCTCCGCCCAAGGAGCTTTACTTCAACCACGATGGCTCTACTTTTAAAAAACTTCAGGTCGGAGTTAATTTGGTAGCGGAGCTGGTGGGTATTACCTTGGGACCGAAGGGGAGGAATGTGGTGCTTCAGAATAAATATGGACCGCCCAAGATCGTCAACGATGGTGAAACCGTCCTGAAAGAGATTGAGCTGGAAGACCCTTTAGAGAACGTTGGGGTGAAATTGGTGAGACAAGCTGGTGCTAAGACGAATGACCTTGCTGGTGATGGTTCCACTACATCTGTCGTTCTTGCCCAAGGATTGATTGCTGAGGGTATGAAGGTTATTGCATCTGGCATGAATCCTATTCAAATTGCACGTGGGATTGAGAAGACTGCAAAAGCACTAGTTTCTGAGCTGAAATTGATGTCAAGAGAGGTTGAAGACCACGAGATAGCACACGTGGCCGCAGTTAGCGCAGGGAATGATTATGCTGTGGGAAAATTGGTTTCAGATGCCTTGCGTCAAGTTGGATGGAAGGGAGTCGTCCAAATTGAAAAAGGGAAGAGTGTGGATAATAGTTTGCAAATTGTTGAAGGGATGCAATTTGATCGTGGATATTTATCCCCATACTTTGTGACTGATAGAAGGAAGATGGTAGTAGAATTCCACGAGTGCAAGTTACTGTTGGTCGACAAAAAAATTTCAGATCCAAAGGAGATGTTTAAAATATTGGACAATGCAGTGAAAGAGAAATACCCAATTGTGATATTGGCAGAGGGCATTGAGCCGGAAGCTCTGGTTCCAGTAATTAGGAATAAACTTAGAGGTGTGCTGAAGGCAGCTGCTATCAAGGCTCCTGCCTTTGGCGAGCGCAAGAGTCACTATTTAGATGACATAGCCACCTTAACTGGAGCTACCGTGGTCAGAGAAGATAATGGATTGACGTTAGAAAAAACCGGCAAAGAGGTATTGGGATCCGCTTGTAAGGTTGTTATATCAAAAGATTCCACACTGATAGTTACAGATGGGAATACTCGGGAAGCTGTTCAGAAAAGGGTCTTACAAATTCAAAAGCTTATGGAGAACACTGAGGAAAAATTTCCGAAGAAGATATTGAATGAGAGAATTGCAAGATTATCTGGGCGAATTGCAATAATTCAGGTAGGAGCACAAACTGAAGTTGAGTTGAAGGATAGACAGTTAAGGATCGAGGATGCTTTGAATGCATCAAAGGCTGCTATTGAAGAAGGTGTTGTTGTTGGTGGAGGTTGTTGTCTTTTAAGGCTGTCTACAAAGGTGGATGCTATAAAAAATGTCCTGGAAAATGACGAGCAGATGATTGGAGCCGAAATTTTCAAAAGGGCTTTGAGTTATCCTACAAAACTAATAGCGAGAAATGCCGGTGTCAATGGAAGTGTTGTTATAGATAAGATTCTAAGTAACAATGATCTGGATTATGGATATAATGCCGCCACAGACCGTTACGAGGATCTAATGAAAGCTGGTATCATGGATCCATCAAAGGTTGTTAGATGTTGCCTGGAGCATGCAGCTTCTGTTTCCAAAACTTTCCTGACATCCGATGCTGTTGTAGTTGATATGAAGGAATCACAGCTCATCCCAAGAAGAACACCGATGCCAATCTCAGTGAGACCTTTCATTAGAAGTTCTTTCCCGCGCTCAAAACTCTTCTCTACTTTCGCTTTCATTCCCAAAGCTTCCCGCCAACCAGGCTCCTTCCAGTTGCCTCAGAATTCCTCCTTCAAGGGTGTGCGGTATGACAGTCCAGTAATGGGTGCAATGGAGTTATCTGATCTTGAAGATGTGGATTTGTTGGTGGAGATGTGCATTACGCGTACATTGCCACCGGCTCTAACGCTTAAGCAGGGTCTGGAGAGTATAACTGAGGCTATTGAAAAGTTTAAATTAGAATCTCCACGTTCTTCCCAGGGAGTTTTCAGGTTTCAGGTGGCTGTTCCCCCGAGTGCAAAAGCTCTTTTGTGGTTCTGTTGTCAACCAGAGTCATCTGAAGTTTATCCTATATTTTTCCTTTCCAATGAGAAGGACCCGACGATTAAATCATTGTACTTGAATGATACCCGCGGTGTTTTTGGAATTGGTACTGCAATTTACTTTGCAAGCTTGTCTTCTACTTCATCAAAACAAAGTACATTGAAAAGGTATGTCATGAATGATTCAGCTCCTATTATGGCTTATGGTTTTGTCAATGCTAATAACGGGGAGACATCTTCACTAAAGAACGAGGCTGGTCATTCATACTATTGCGTTCCCCAAATTGAGTTGAGTGAGTACGAGGGCATTTCTGTTCTCTCTGCAACACTTGCATGGAGTGAATCTTTCCTTTGTACATTTGAGGAAGCTCTCCATTCTTTGGGCTCATCTATCTACCAGATCAGTACTAATTTTCCATCTAGTGAAAACTGCCAGTACAAATATTTAAAATCTTCATTAACTGCTTCAAAACTTGTGGACGGAACAAATCAGATGGCATACATGAAAGTGCTTTCTGTAGCTGGTGAAAGTGTCAGGACAGGCATCATGGAAATGGAGTCTTCACTCTTCCATCAGTTCTGCATTAGGCTTTCACCAAGTGTTGCCGTTGCATCTAATATGTTGGATGATATCAACGAAACTGGCCACTCAGAGCAAGAGCATACCAACATTAATGCTCTCTGGGCATCGCTGCTAGTTGAAGAATGTTCTCGTCTTGGTTTGACGTATTTTTGCATAGCTCCTGGATCAAGATCATCGCCGCTTGCCATCGCTGCTGCAAGTCATCCCCTGATAACATGTATTGCATGCTTTGATGAACGCTCTCTTGCTTTTCATGCTATTGGGTATGCCAAAGGATCTCATAGCCCAGCAGTAGTAATCACATCATCTGGCACTGCTGTTTCAAATCTTCTTCCTGCTGTTGTTGAAGCTAGTCAAGACTTTCTTCCTCTTTTATTGCTCACAGCCGACCGTCCCTCGGAGCTACAGAATGCAGGAGCAAATCAAGCTATTAATCAGGTAAACCATTTTGGTTCATTTGTGAGGTTCTTCTTCAGTCTTCCGGCCCCAACTGATCAAATTCCCGCCAGAATGGTACTTACCACTCTTGATTCTGCTGTACATTGGGCAACTTCTTCACCCTGTGGCCCCGTTCACATAAACTGTCCATTTAGAGAACCACTGGAAAATAGTCCAAGCCCATGGAATTTGAGTTGCTTAAATGGTTTACACATTTGGTTATCAAGCACTGAAGTTTTTACCAAATATATTCGACTTGAAGCATCTCCAACATCTACTGATACTTTTGGTCATATGGCAGAGGTTTTGAAAGTAATCCATGGAGCCAGAAACGGAGTTCTACTTCTTGGATCAATTCAATCAGAGGATGAGATATGGGCTGCTTTTCTATTGGCCAAACATATTTCATGGCCTATAGTGGCTGATGTATTGTCTGGTTTACGATTAAGGAAGAGTTTGTCTCCCTTCCTAGAAATGGAAAATAACTTTTTCTTTATTGATCACCTTGATCATGCTTTGCTTTCAGATTCGGTGAGAAAATGGCTAAAATTTGACGTGATTATTCAGATCGGAAGCAGGGTAACAAGCAAACGTGTTTCAAAGTTGCTTGAGGATTGCAGTCCCTGTTCATACATCATGGTTGATAAGCATCCAGGTCGTCATGATCCATCACATATTGTAACCCATAGAATTCAAAGCACCGTCTTAGAGTTTGTTGGTTGTTTACTTAAAGCTAGTTTTCCTCTCAATAAGAGCAAGTTGACTGCTACTTTACGAGCATTGAATATGATGGTTGAGTGGGAAATTCAATTTCAAATTTCTGCTAACTACTCTCTATCTGAGCCAGAAGTTGCTCAGGTAATCTCAGAAGCACTTTCATTTGATTCTGTTCTGTTCCTGGGGAACAGCATGCCAATCCGCGATGTGGATATGTATGCATATGGTTGGTCAAAATGCAACGACAGTGTAGCTGCTATACCATTAAACTTACAAATGCCATTTTACTGGACATGGACTTCTGGAAATAGGGGAGCCAGTGGCATTGACGGACTTCTTAGCTCAGCAGTTGGTTTTTCTGTTGGATGCAACAAACGAGTGCTTTGTCTAGTTGGAGATGTTTCTTTTCTTCATGATACAAATGGCTTAGCAATTCTGAACCAGAGGATGAAGAGGAAACCTGTGACTGTCGTTGTAATCAATAATAATGGTGGGGCAATCTTCAGTCTCCTTCCTATCAAGGACAAAGTAGATGCAGCAATACTAGACCAATTCTTCCACACCTCTCACCAGGTTTCACTCCGAAACCTATGTGTGGCACATGGCCTGAAGCATTTACATGTACGGACAAAGAAGGAACTTCAAGATGCTTTATTTATGTCTCATCATGAAGAAAATGACTGCATAATCGAGGTCGAAAGTTCCATTGATGCCAATACTACCTTCCACAGTGTCTTGAGGAAGTTCACTTGTCAAGCAGTAGATCATGGTTTACGCATCTTTTCAAGGCTTTATTCTGAAGAATCTGTTTCACCTGGACTCTTCCTTTGCAAGATAAGTAGAATGGAATGCACATTGTTCAGAATCCCGCTATGTGCTCCACCTACGACTTCATCTAGTTCTATTGATCAAGTCAGACAGGAGTTCTTCCGAGAAGGTTTTATTTTGTCTTTGTTTCTGGAGGATGGGAGTCTTGGGCTTGGTGAGGTTTCACCCCTTGACATCCACAGAGAGAACCTACTAGATGTGGAAGAGCAACTTAAGTGTCTCATTCCTATATTAAAGGGAGCCAAGATCAGCAGCTCCATTCCTATGCTACGGGGCTCGTTTTCGTCTTGGATTTTCCATGAACTGGGAATATCACCAAGTTCAATCTATCCAAGTGTTCGATGTGGTTTGGAAATGGCTGTTCTCCATGCCATAGCAGGGAGAAAAGGTTGCAGCTTGTTAGATGTACTCCAGCATCAGTTAGATGAAAAGAACTTGACAACTTCGTCAAAAGTTCAAATTTGTGGGCTTTTGGATTCCGGTGGAACTCCATCTGAGGTTGCTTATGTTGCTAAGACACTTGTAGAAGAAGGATTTCCTGCTATCAAGTTAAAGGAAACCCGACAACGGAATGTCATGTATGATGCTGCTGTTGTACAGGAAGTAAGGAAGCAGCTTGGCAACCAAATTGAACTCCGCGTTGATGCCAATAGGAACTGGAGCTATGAAGAAGCTCTTTTATTTAGCTCTTTGGTGAAGGACTGTGGCCTCCAATATATTGAGGAACCAGTTATGGATGAAGATGCTATTATTAAATTTTGTGAAGAGAGTGGTTTACCTGTCGCACTGGATGAAACTATCGATCGTATTCAAGATAATCCTGTGAAAGAACTTGCCAAGTATGTCCATCCAGGAATTGTTGCTATAGTTATAAAACCAAGTGTGGTTGGCGGATTTGAAAATGCGGCATTAATAGCGAGGTGGGCACATCAACATGGAAAAATGGCTGTTGTTAGTGCTGCATTTGAAAGTGGTGTAGGTTTGTCCGGATATGTACACTTATCCTGTTATCTGGAGCTTCAGAATGCAGAAGTAAGAAAACTGATGAATATTCAACCAGCCTCATCTATAGCCCACGGTCTAGGAACTTACCGTTGGCTTGAAGAAGATGTAACTGTCAATCCTCTCAGATTTCGGCGTGACCCTCATAGTGGCATCATTGAAGCATCTGTTGCTGAGGCTAATCAGCTTTTAGAAAATTTTCAAATCAATCAGAAGATTGTTTGTAGAAAATTTAATGACGGGCAAGTTCGCAGCTACAGATTAAGTGTAAACTCAAAGGGGTTCTCTTATTCAATTAAAGTTCTAGAGGTTGGACAAAGAACAAACGATAACGTGCTCTTCTTTCTTCATGGATTTCTTGGAACTGGTGAAGACTGGCTTACAATCATGAAAGGCGTCTCAGGTTCAGCCAGATGCATTTCTCTTGACCTGCCTGGTCACGGGGAGTCAACAACAGAAAAGAACGATTGTGATGTTCATGGTGTGGAGGAACCAAGTTTTTCAATGGAGGTTGTTGCTGATCTACTGTATAAGTTGATTCAACATCTTGCTCCTGGTAAAGCTATAGTTAACGTTGTAGGGTATTCAATGGGGGCTAGGATTGCCATGTACATGGCCCTGAGATTTGGTGACAAGATTGGAAGAGCTGTTATAATATCTGGAAGCCCTGGATTAAAAGACAAGGTGGCAAGAAAAATCCGTAGAGTTAAAGATGATTCTAGAGCACGAATCCTTAAGCTCTATGGCTTACAAAGCTTTCTGGAAGCGTGGTATGGTGGGGAACTGTGGAAAAGTTTAAGAGAACATCCACATTATAGTCAAATTATTGCCAGACGATTGAAGCATGATGATGTGCAGCATCTTGCAAAAGCTCTATCTGAATTAAGCATTGGAAGGCAGCCGCAATTGTGGGATGAATTAAAATGCTGCAAAACACCTCTTTCGATCATTGTTGGGGAGAAGGATACAAAATTTAAGACAATTGCACAGCAAACTCTATCTCAAATCAATATGAGCAAGAAGATCAAAGATGAACCAGCTGTTGATCTCCATGAAATAGTTGAGATCCCGGACTCAGGACATGCTGCCCATCTGGAGAATCCTCTTGCTGTTGTCAATGCATTAAGTAGATTTCTAATAAGGAGAAGAACACAGCACTCTTCCAACGTGGATTTAGCAGGAGATTGGTTGAAATGTCCAAGCTTGAACATGTCTTACCAAGGATATGGAAATGCTGGGCAAAACAAGTATCTGGACTTTTATAGATATCTCTTCTGTTCTTCATTGTAA 6996 42.1 MASSPTPISPLSFTNPISTSRTKPKPLPLPFPNKPPSSLPPALNPNPKPPPKELYFNHDGSTFKKLQVGVNLVAELVGITLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIASGMNPIQIARGIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGKLVSDALRQVGWKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALVPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTGATVVREDNGLTLEKTGKEVLGSACKVVISKDSTLIVTDGNTREAVQKRVLQIQKLMENTEEKFPKKILNERIARLSGRIAIIQVGAQTEVELKDRQLRIEDALNASKAAIEEGVVVGGGCCLLRLSTKVDAIKNVLENDEQMIGAEIFKRALSYPTKLIARNAGVNGSVVIDKILSNNDLDYGYNAATDRYEDLMKAGIMDPSKVVRCCLEHAASVSKTFLTSDAVVVDMKESQLIPRRTPMPISVRPFIRSSFPRSKLFSTFAFIPKASRQPGSFQLPQNSSFKGVRYDSPVMGAMELSDLEDVDLLVEMCITRTLPPALTLKQGLESITEAIEKFKLESPRSSQGVFRFQVAVPPSAKALLWFCCQPESSEVYPIFFLSNEKDPTIKSLYLNDTRGVFGIGTAIYFASLSSTSSKQSTLKRYVMNDSAPIMAYGFVNANNGETSSLKNEAGHSYYCVPQIELSEYEGISVLSATLAWSESFLCTFEEALHSLGSSIYQISTNFPSSENCQYKYLKSSLTASKLVDGTNQMAYMKVLSVAGESVRTGIMEMESSLFHQFCIRLSPSVAVASNMLDDINETGHSEQEHTNINALWASLLVEECSRLGLTYFCIAPGSRSSPLAIAAASHPLITCIACFDERSLAFHAIGYAKGSHSPAVVITSSGTAVSNLLPAVVEASQDFLPLLLLTADRPSELQNAGANQAINQVNHFGSFVRFFFSLPAPTDQIPARMVLTTLDSAVHWATSSPCGPVHINCPFREPLENSPSPWNLSCLNGLHIWLSSTEVFTKYIRLEASPTSTDTFGHMAEVLKVIHGARNGVLLLGSIQSEDEIWAAFLLAKHISWPIVADVLSGLRLRKSLSPFLEMENNFFFIDHLDHALLSDSVRKWLKFDVIIQIGSRVTSKRVSKLLEDCSPCSYIMVDKHPGRHDPSHIVTHRIQSTVLEFVGCLLKASFPLNKSKLTATLRALNMMVEWEIQFQISANYSLSEPEVAQVISEALSFDSVLFLGNSMPIRDVDMYAYGWSKCNDSVAAIPLNLQMPFYWTWTSGNRGASGIDGLLSSAVGFSVGCNKRVLCLVGDVSFLHDTNGLAILNQRMKRKPVTVVVINNNGGAIFSLLPIKDKVDAAILDQFFHTSHQVSLRNLCVAHGLKHLHVRTKKELQDALFMSHHEENDCIIEVESSIDANTTFHSVLRKFTCQAVDHGLRIFSRLYSEESVSPGLFLCKISRMECTLFRIPLCAPPTTSSSSIDQVRQEFFREGFILSLFLEDGSLGLGEVSPLDIHRENLLDVEEQLKCLIPILKGAKISSSIPMLRGSFSSWIFHELGISPSSIYPSVRCGLEMAVLHAIAGRKGCSLLDVLQHQLDEKNLTTSSKVQICGLLDSGGTPSEVAYVAKTLVEEGFPAIKLKETRQRNVMYDAAVVQEVRKQLGNQIELRVDANRNWSYEEALLFSSLVKDCGLQYIEEPVMDEDAIIKFCEESGLPVALDETIDRIQDNPVKELAKYVHPGIVAIVIKPSVVGGFENAALIARWAHQHGKMAVVSAAFESGVGLSGYVHLSCYLELQNAEVRKLMNIQPASSIAHGLGTYRWLEEDVTVNPLRFRRDPHSGIIEASVAEANQLLENFQINQKIVCRKFNDGQVRSYRLSVNSKGFSYSIKVLEVGQRTNDNVLFFLHGFLGTGEDWLTIMKGVSGSARCISLDLPGHGESTTEKNDCDVHGVEEPSFSMEVVADLLYKLIQHLAPGKAIVNVVGYSMGARIAMYMALRFGDKIGRAVIISGSPGLKDKVARKIRRVKDDSRARILKLYGLQSFLEAWYGGELWKSLREHPHYSQIIARRLKHDDVQHLAKALSELSIGRQPQLWDELKCCKTPLSIIVGEKDTKFKTIAQQTLSQINMSKKIKDEPAVDLHEIVEIPDSGHAAHLENPLAVVNALSRFLIRRRTQHSSNVDLAGDWLKCPSLNMSYQGYGNAGQNKYLDFYRYLFCSSL* 2332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15925655 15948944 - Chy10G182780.1 Chy10g01084 235459

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01084 2331 Gene3D - 1148 1324 - -
Chy10g01084 2331 Gene3D GroEL 241 422 IPR027409 -
Chy10g01084 2331 SUPERFAMILY Enolase N-terminal domain-like 1570 1705 IPR029017 -
Chy10g01084 2331 Pfam TCP-1/cpn60 chaperonin family 73 576 IPR002423 GO:0005524
Chy10g01084 2331 PRINTS 60kDa chaperonin signature 77 103 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 PRINTS 60kDa chaperonin signature 399 424 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 PRINTS 60kDa chaperonin signature 133 160 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 PRINTS 60kDa chaperonin signature 447 468 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 PRINTS 60kDa chaperonin signature 317 340 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 SUPERFAMILY GroEL apical domain-like 234 425 IPR027409 -
Chy10g01084 2331 TIGRFAM menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 941 1412 IPR004433 GO:0009234|GO:0030976|GO:0070204
Chy10g01084 2331 Gene3D - 1570 1707 IPR029017 -
Chy10g01084 2331 SMART MR_MLE_2 1732 1828 IPR013342 -
Chy10g01084 2331 SUPERFAMILY GroEL equatorial domain-like 60 573 IPR027413 -
Chy10g01084 2331 Hamap 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 1999 2282 IPR022485 GO:0009234|GO:0070205
Chy10g01084 2331 Hamap 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 935 1542 IPR004433 GO:0009234|GO:0030976|GO:0070204
Chy10g01084 2331 MobiDBLite consensus disorder prediction 23 52 - -
Chy10g01084 2331 PANTHER 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE SYNTHASE 745 2283 IPR004433 GO:0009234|GO:0030976|GO:0070204
Chy10g01084 2331 SUPERFAMILY alpha/beta-Hydrolases 2001 2281 IPR029058 -
Chy10g01084 2331 SUPERFAMILY DHS-like NAD/FAD-binding domain 1097 1313 IPR029035 -
Chy10g01084 2331 ProSitePatterns Mandelate racemase / muconate lactonizing enzyme family signature 2. 1780 1811 IPR018110 GO:0009063
Chy10g01084 2331 SUPERFAMILY Enolase C-terminal domain-like 1728 1948 IPR036849 -
Chy10g01084 2331 Pfam alpha/beta hydrolase fold 2013 2125 IPR000073 -
Chy10g01084 2331 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 1331 1524 IPR029061 -
Chy10g01084 2331 TIGRFAM menC_gamma/gm+: o-succinylbenzoate synthase 1603 1913 - -
Chy10g01084 2331 Coils Coil 388 408 - -
Chy10g01084 2331 MobiDBLite consensus disorder prediction 1 22 - -
Chy10g01084 2331 SUPERFAMILY GroEL-intermediate domain like 191 255 IPR027410 -
Chy10g01084 2331 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 934 1115 IPR029061 -
Chy10g01084 2331 CDD GroEL 53 575 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 Gene3D - 1708 1952 IPR036849 -
Chy10g01084 2331 CDD TPP_SHCHC_synthase 1332 1527 - -
Chy10g01084 2331 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 943 1111 IPR012001 GO:0030976
Chy10g01084 2331 TIGRFAM GroEL: chaperonin GroL 52 578 IPR001844 GO:0042026|GO:0140662
Chy10g01084 2331 Gene3D alpha/beta hydrolase 2004 2282 IPR029058 -
Chy10g01084 2331 Gene3D - 933 1129 - -
Chy10g01084 2331 ProSitePatterns Chaperonins cpn60 signature. 454 465 IPR018370 GO:0005524|GO:0006457
Chy10g01084 2331 Pfam Enolase C-terminal domain-like 1738 1921 IPR029065 -
Chy10g01084 2331 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 1397 1510 IPR011766 GO:0003824|GO:0030976
Chy10g01084 2331 CDD TPP_PYR_MenD 943 1104 - -
Chy10g01084 2331 Pfam Middle domain of thiamine pyrophosphate 1121 1353 IPR032264 -
Chy10g01084 2331 Gene3D - 187 459 IPR027410 -
Chy10g01084 2331 Gene3D - 1331 1541 - -
Chy10g01084 2331 MobiDBLite consensus disorder prediction 1 53 - -
Chy10g01084 2331 SFLD Enolase 1602 1945 - -
Chy10g01084 2331 SFLD o-succinylbenzoate synthase 1602 1945 - -
Chy10g01084 2331 Gene3D - 64 574 IPR027413 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01084 K14759 PHYLLO; isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113] - csv:101217012 3276.49
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01320 Chy-Chr2:9773032 Chy10g01084 Chy-Chr10:15925655 0 dispersed
Chy02g02516 Chy-Chr2:28549265 Chy10g01084 Chy-Chr10:15925655 1.24E-18 dispersed
Chy03g00080 Chy-Chr3:825355 Chy10g01084 Chy-Chr10:15925655 2.50E-06 dispersed
Chy04g01909 Chy-Chr4:25106131 Chy10g01084 Chy-Chr10:15925655 1.25E-06 dispersed
Chy10g01084 Chy-Chr10:15925655 Chy11g00828 Chy-Chr11:11803133 1.57E-156 dispersed
Chy12g01413 Chy-Chr12:18226809 Chy10g01084 Chy-Chr10:15925655 1.38E-10 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1016 . . . . . . . . Cmo04g01638 . . . Car04g01619 . . . Cpe01g01391 Bhi07g01424 . . . . . . Cla05g02365 Cam05g2535 Cec05g2564 Cco05g2603 Clacu05g2531 Cmu05g2391 Cre05g2507 . . . . Lsi04g00326 . Chy10g01084 Cme10g00326 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005896 1 7 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 1 1 1 1 1 1 2 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy10g01084 Chy_Chr10 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.366555