Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01087 ATGGGAATCTCAAATAAAGTTTATGGAGTTATAATGATGATTGTGTTTTGTGATTTGTTTGTTGTGAGCTATAGTTTGTTTGAAACAGGGGAGACCCGATTGACATTGGATTACTATACCAAAACTTGTCCCAATGTGTTGCCGATTGTGAGGAAAGAAATGGAGTGTGCTGTTCTTTCTGAACCACGTAATGCAGCTTTTGTTGTTCGATTGCACTTTCATGATTGTTTTGTTCAGGGGTGCGACGGGTCGGTTTTGCTGGATGACACAATAACATTACAGGGAGAAAAAAAAGCTTCCGACAACATCCACTCTCTCAAAGGCTTTAGAATCATTGATAGGATAAAGAACAGCATTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCTGATATACTCACTATTGCAGCCAGGGATGCTGTTATTCTGGTGGGTGGGCCTTACTGGGATGTTCCACTAGGAAGAAAGGATTCGACAAGTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTCAGCATCATCTCCAAGTTTCTATATCAGGGTCTCTCGGTTACTGACATGGTAGCTCTATCAGGAGCGCACACGATTGGAATGGCGAGGTGCGAGAATTTCAGACAGAGAATTTACGGGGATTTCGACGCGACTTCAGATCCAAACAACCCGATTTCGGGGTCGTACATCGAGAAGTTAAGGTCAATTTGTCCATTAGTTGGTAAAACAGGAGAGAACAACATAACAGCAATGGACAATATGACACCAGAGCTATTTGACAACTCTTATTTCCACATGTTGATGAGAGGAGAAGGGGTTTTGAATTCAGATCAAGAATTGTATTCAAGCCTTTTGGGCATAGAAACTAAGGCATTGGTGAAGAAATATGCTGCTGATCCAATTGCTTTCTTTCAGCAATTCTCTGATTCTATGGTGAAATTGGGAAATATTACCAATTCTGATAGCTTTGTCAATGGGGAAGTTAGGAAAAACTGCAGGTTTATTAATACATGA 1026 41.03 MGISNKVYGVIMMIVFCDLFVVSYSLFETGETRLTLDYYTKTCPNVLPIVRKEMECAVLSEPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASDNIHSLKGFRIIDRIKNSIESECPGIVSCADILTIAARDAVILVGGPYWDVPLGRKDSTSASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRQRIYGDFDATSDPNNPISGSYIEKLRSICPLVGKTGENNITAMDNMTPELFDNSYFHMLMRGEGVLNSDQELYSSLLGIETKALVKKYAADPIAFFQQFSDSMVKLGNITNSDSFVNGEVRKNCRFINT* 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15964073 15967105 + Chy10G182810.1 Chy10g01087 235462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01087 341 CDD secretory_peroxidase 34 339 IPR033905 GO:0004601|GO:0042744
Chy10g01087 341 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 ProSiteProfiles Plant heme peroxidase family profile. 33 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 Gene3D - 38 340 - -
Chy10g01087 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Chy10g01087 341 Gene3D Peroxidase, domain 2 171 318 - -
Chy10g01087 341 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Chy10g01087 341 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PANTHER PEROXIDASE 11 26 339 - -
Chy10g01087 341 SUPERFAMILY Heme-dependent peroxidases 34 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 Pfam Peroxidase 50 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy10g01087 341 PANTHER PEROXIDASE 72-RELATED 26 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01087 Chy-Chr10:15964073 Chy03g00215 Chy-Chr3:2013946 8.21E-100 dispersed
Chy10g01087 Chy-Chr10:15964073 Chy02g00611 Chy-Chr2:3712025 5.85E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01087 K00430 - csv:101216779 665.996