Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01091 ATGGCTATTAAAGCTGCTTTGAAAGACCCACATTCTGTTCTTAATTGGGATGAAAACGCTGTGGATCCATGTAGTTGGAGCATGATTACTTGTTCTTCAGAGAAGTTTGTCATTAGTTTAGGAGCTCCAAGTCAGAACTTGTCCGGTAGCCTGTCGCCGAGCATCGGAAATTTGACAAATCTTCAGTCTGTGCTTCTACAGGACAATAATATATCAGGAACAATTCCAATGGAGCTTGGGAACATACCTAGCCTTGACACTCTTGATCTTTCAAGCAATGGCTTCCATGGAGAAATTCCCACTTCTCTTTCCCATCTTAAGAGTCTTCAATATCTGAGACTAAATAACAACAGTCTTTCTGGGGCTATTCCTTCATCTTTGGCCAACATGACTCAGCTGGCATTGTTGGACCTGTCTTTTAATAATCTGAGTGGCCCATTGCCCAGATTACTAGCTAAAACCTACAACCTTGCTGGGAATTCACTCATTTGCTCGCCTGGGTCAGAGCATAGCTGCAATGGAACTGCTCCACCTCTCTTATTTGCTGTCAATACATCTCAAAATCCACAACCTTCTGGGAGATCCAAGGGCCACAAATTAGCCTTAGCTTTTGGCTCAAGCCTTGGATGTGTTTTCCTGTTAACCATTGGGTTTGGCTTCTTTATTTGGTGGAGGCAACGACACAACCAGCAGATTTTCTTTGATGTTAATGTTTCAGATCAAAGATTTGAAGAAGTTTGCCTTGGGAATCTAAGGATTTTTCAGTTCAGAGAGCTTCAAGCCGCTACAAACAACTTCAGCAGTAAAAACTTGGTGGGAAAAGGTGGATTTGGGAATGTTTACAAAGGGTATCTTCAAGATGGTACAATTATTGCTGTGAAAAGGTTAAAAGATGGAAATGCAATGAGAGGAGAAATCCAATTCCAGACTGAAGTTGAGATGATCAGCTTAGCTGTGCACCGGAACCTCCTCCGTCTCTACGGATTCTGCATGACAACCACAGAAAGACTGTTGGTTTACCCCTATATGTCGAACGGCAGCGTTGCATCTCGTCTCAAAGCCAAGCCAGCTCTGGATTGGAGCACCAGGAAAAGAATAGCATTGGGAGCAGCAAGAGGGTTACTGTATTTGCACGAGCAATGTGACCCTAAGATCATACACAGAGATGTCAAGGCTGCAAATATATTGCTTGATGATTATTGCGAGGCTGTGGTGGGAGATTTTGGACTGGCAAAGCTGTTGGATCATAGAGATTCACATGTAACAACTGCTGTACGAGGAACTGTTGGCCATATAGCTCCTGAGTATCTCTCCACTGGCCAATCTTCCGAGAAAACTGATGTGTTTGGATACGGAATTCTTCTTCTTGAGTTGATCACAGGACAGAGAGCTCTTGAATTTGGAAAAGCTGTTAATCAGAAAGGAGCGATGCTTGATTGGGTCAAGAAAATCCACCAAGAAAAGAAGCTTGAAATACTAGTTGATAAGGATCTAAGGAGCAATTACGACCGAATTGAGCTAGAAGAAATGGTTCAAGTAGCTCTCTTATGCACACAGTATCTTCCAACCACCAGACCTAAGATGTCTGAAGTGGTCAGAATGCTTGAAGGGGATGGACTTGCGGACAAATGGGAAGCTTCTCAGAGGGCAGATGCAAACAGATACAGAGTCAATGAGTTCTCTTCGTCGGAGCGATATTCTGATCTTACAGATGACTCTTCCCTGCTTGCACAAGCCATGGAGCTTTCTGGACCGAGATAA 1761 43.44 MAIKAALKDPHSVLNWDENAVDPCSWSMITCSSEKFVISLGAPSQNLSGSLSPSIGNLTNLQSVLLQDNNISGTIPMELGNIPSLDTLDLSSNGFHGEIPTSLSHLKSLQYLRLNNNSLSGAIPSSLANMTQLALLDLSFNNLSGPLPRLLAKTYNLAGNSLICSPGSEHSCNGTAPPLLFAVNTSQNPQPSGRSKGHKLALAFGSSLGCVFLLTIGFGFFIWWRQRHNQQIFFDVNVSDQRFEEVCLGNLRIFQFRELQAATNNFSSKNLVGKGGFGNVYKGYLQDGTIIAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKAKPALDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGYGILLLELITGQRALEFGKAVNQKGAMLDWVKKIHQEKKLEILVDKDLRSNYDRIELEEMVQVALLCTQYLPTTRPKMSEVVRMLEGDGLADKWEASQRADANRYRVNEFSSSERYSDLTDDSSLLAQAMELSGPR* 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15982725 15985599 - Chy10G182850.1 Chy10g01091 235466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01091 586 Gene3D Transferase(Phosphotransferase) domain 1 343 555 - -
Chy10g01091 586 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 586 - -
Chy10g01091 586 SUPERFAMILY L domain-like 13 157 - -
Chy10g01091 586 Gene3D Ribonuclease Inhibitor 1 174 IPR032675 -
Chy10g01091 586 SUPERFAMILY Protein kinase-like (PK-like) 243 536 IPR011009 -
Chy10g01091 586 SMART serkin_6 266 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01091 586 Gene3D Phosphorylase Kinase; domain 1 234 342 - -
Chy10g01091 586 Pfam Protein kinase domain 267 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01091 586 Pfam Leucine rich repeat N-terminal domain 2 32 IPR013210 -
Chy10g01091 586 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 586 - -
Chy10g01091 586 Pfam Leucine rich repeat 83 143 IPR001611 GO:0005515
Chy10g01091 586 ProSiteProfiles Protein kinase domain profile. 266 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01091 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Chy10g01091 586 ProSitePatterns Protein kinases ATP-binding region signature. 272 294 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02154 Chy-Chr2:25783355 Chy10g01091 Chy-Chr10:15982725 0 dispersed
Chy03g01723 Chy-Chr3:18729498 Chy10g01091 Chy-Chr10:15982725 0 dispersed
Chy01g00121 Chy-Chr1:779542 Chy10g01091 Chy-Chr10:15982725 3.47E-08 transposed
Chy01g00273 Chy-Chr1:1911289 Chy10g01091 Chy-Chr10:15982725 0 transposed
Chy03g00283 Chy-Chr3:3020869 Chy10g01091 Chy-Chr10:15982725 0 transposed
Chy07g01304 Chy-Chr7:17710286 Chy10g01091 Chy-Chr10:15982725 0 transposed
Chy09g00415 Chy-Chr9:3647389 Chy10g01091 Chy-Chr10:15982725 0 transposed
Chy11g00012 Chy-Chr11:184979 Chy10g01091 Chy-Chr10:15982725 3.60E-163 transposed
Chy10g01091 Chy-Chr10:15982725 Chy09g00168 Chy-Chr9:1428418 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71516 PF00069 Pkinase 6.80E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01091 - - csv:101208127 1155.97