Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01098 ATGGCGTCCGTATCACCGGCGCCTTTTTCATCTCCGTCGCCGGCTTCTCCCTCCACTCCATCTCTGTTGCCTCCTGCCGCATCTAATTCCCCACCCAGTACTCCGTCACCGTCGCCGCCGCAACAATCGCCTCCTTCGAATCAGTCTGACAACGCCACTCCTAGTTCATCTCCTCCGCCGCCGTCTCATCAACCATCTGCTACTTCACCTCCACCTACATCTGAAACTCCCCCGCCATCAACACCTGCATTGTCTCATCCGCCGCCTCCGACGGTTCCGCCGGCAACTCCATCACCAACTCCGCCCAATGCTCCACCCCCAACAACACCGGACCCTCCATCACCAGTAAGCTCCACTCCCCCAACGCCGTCTGATCCCCCACCAAATTCACCTCCACCTCCTGCAGCAGAGCCTCCTCAATCCCCTCCCCCACAATCATCAAAACCACCTGAAAATCCCCCTCCGCCACCACCACCACCATCACAAGCAAACCCGCCGGACAATCCATCACCACCGCCACAACCCATAAACCCACCTGAGAGTTCACCCCCGCCCCCACCATCAGCACCTCCAGAAACCTCACCTCCCTCCCCAGCATCAATACCTCCTAGAAATTCACCGCCACCCCCAAGGCTTTCTCCCCCTCCCAGTGATCCCTCACCGTCAAGTCCTCCTCCCAATTCATCGCTACCCCCATCTCCACCACCTCCGCCGTCGCGTCTTTCTCCTCCATTACCTTCTAAACCCCCAACATTGCCGTCGGGGAATCGTACGGGCGATGGTTCTGGTTCTAATGATGGAGGAGCAAATTCTAATTCCAACAGCAATGGAGGAATCAGTAGTGGGGGTGTGATTGCCATTGGTGTAGCGGCAGGAATTGTAGTGCTTTTCATAATTGGATTTGTTGTATGGTACATCAGAAAGCCAAGGAAAAATGATTCTGGGCGTGGAGGTTACATTATGCCATCCTCTCTGGGTTCCTCTCCTAAGTCGGTTCATCAAGACATACATGCCACCGGCAGTGGCAGTGGGAGTGGCAGTGGTGGAATGTACACTCCAAGAGAGCCTGGTGGGCTGGGGAGTTCGAGGCCATTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTACTCAGAACCTCTTAGGAGAAGGAGGATTTGGTTCTGTTTATAAAGGATATCTTCCAGATGGAAGAGTGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGCCAAGGTGAGCTGGAATTCAAAGCTGAAGTCGAGATTATTGGTCGTGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTATTGTATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCTCTAACAATTCACTTTACTACCATCTTCATCTCAAAGGCAATGGTGAGCTCGTTCTGGAATGGGCAAAGCGCATTAAGATCGCAGCTGGTGCAGCCCGGGGCATTGCTTATCTTCATGAAGACTGTCATCCTCGAATTATCCACCGTGATATCAAATCCTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGAGTTTCAGACTTCGGGCTTGCCAAATTAGCTCTCGATGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCAAGTGGAAAGTTAACCGAGAGATCAGATGTATTTTCTTTTGGAGTTGTACTTCTCGAGCTGATTACTGGTCGAAAGGCTGTGGATGCATCCCAACCAATGGGGAACGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTTAACCATGCACTCGACAATCAAGATTTCAAAAACTTGGTAGACCCAAGGCTTGAAAGGAACTATGACGAGAGTGAAATGTTGAGGATGATAGGAATAGCTGCTGCTTGCGTGCGCCACTCGTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCAACTGCAGATTTAAGTAATGGAATGAGATTTGGGGAGAGTCAAGGTTTCGACTCCGGTCAACAATCTGCTGAAATTAGATTTTTCCGAATGCTGGCATTCGGTAACCAAGATTACAGTTCAAATTTTTATAGCCAAGGTAGCTCAAATGCCTGA 2124 49.95 MASVSPAPFSSPSPASPSTPSLLPPAASNSPPSTPSPSPPQQSPPSNQSDNATPSSSPPPPSHQPSATSPPPTSETPPPSTPALSHPPPPTVPPATPSPTPPNAPPPTTPDPPSPVSSTPPTPSDPPPNSPPPPAAEPPQSPPPQSSKPPENPPPPPPPPSQANPPDNPSPPPQPINPPESSPPPPPSAPPETSPPSPASIPPRNSPPPPRLSPPPSDPSPSSPPPNSSLPPSPPPPPSRLSPPLPSKPPTLPSGNRTGDGSGSNDGGANSNSNSNGGISSGGVIAIGVAAGIVVLFIIGFVVWYIRKPRKNDSGRGGYIMPSSLGSSPKSVHQDIHATGSGSGSGSGGMYTPREPGGLGSSRPLFTYEELFKATNAFSTQNLLGEGGFGSVYKGYLPDGRVVAVKELKIGGGQGELEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVSNNSLYYHLHLKGNGELVLEWAKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGYVAPEYASSGKLTERSDVFSFGVVLLELITGRKAVDASQPMGNESLVEWARPLLNHALDNQDFKNLVDPRLERNYDESEMLRMIGIAAACVRHSSAKRPQMGQVVRAFDSLATADLSNGMRFGESQGFDSGQQSAEIRFFRMLAFGNQDYSSNFYSQGSSNA* 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16036981 16040474 + Chy10G182920.1 Chy10g01098 235473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01098 707 PRINTS Pistil-specific extensin-like signature 121 139 IPR003882 -
Chy10g01098 707 PRINTS Pistil-specific extensin-like signature 236 257 IPR003882 -
Chy10g01098 707 PRINTS Pistil-specific extensin-like signature 88 111 IPR003882 -
Chy10g01098 707 MobiDBLite consensus disorder prediction 315 356 - -
Chy10g01098 707 PANTHER BNACNNG34790D PROTEIN 100 704 - -
Chy10g01098 707 Gene3D Transferase(Phosphotransferase) domain 1 454 667 - -
Chy10g01098 707 Gene3D Phosphorylase Kinase; domain 1 359 453 - -
Chy10g01098 707 MobiDBLite consensus disorder prediction 10 44 - -
Chy10g01098 707 Pfam Protein kinase domain 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01098 707 ProSiteProfiles Protein kinase domain profile. 378 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01098 707 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Chy10g01098 707 SMART serkin_6 378 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01098 707 MobiDBLite consensus disorder prediction 324 348 - -
Chy10g01098 707 MobiDBLite consensus disorder prediction 1 274 - -
Chy10g01098 707 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 100 704 - -
Chy10g01098 707 CDD STKc_IRAK 384 656 - -
Chy10g01098 707 MobiDBLite consensus disorder prediction 54 251 - -
Chy10g01098 707 SUPERFAMILY Protein kinase-like (PK-like) 362 657 IPR011009 -
Chy10g01098 707 MobiDBLite consensus disorder prediction 252 274 - -
Chy10g01098 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00904 Chy-Chr10:14739630 Chy10g01098 Chy-Chr10:16036981 4.29E-156 dispersed
Chy10g01098 Chy-Chr10:16036981 Chy11g00389 Chy-Chr11:3684568 3.63E-131 dispersed
Chy10g01098 Chy-Chr10:16036981 Chy09g00148 Chy-Chr9:1259517 1.17E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71517 PF00069 Pkinase 1.60E-43 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01098 - - cmo:103489228 808.905