Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g01098 | ATGGCGTCCGTATCACCGGCGCCTTTTTCATCTCCGTCGCCGGCTTCTCCCTCCACTCCATCTCTGTTGCCTCCTGCCGCATCTAATTCCCCACCCAGTACTCCGTCACCGTCGCCGCCGCAACAATCGCCTCCTTCGAATCAGTCTGACAACGCCACTCCTAGTTCATCTCCTCCGCCGCCGTCTCATCAACCATCTGCTACTTCACCTCCACCTACATCTGAAACTCCCCCGCCATCAACACCTGCATTGTCTCATCCGCCGCCTCCGACGGTTCCGCCGGCAACTCCATCACCAACTCCGCCCAATGCTCCACCCCCAACAACACCGGACCCTCCATCACCAGTAAGCTCCACTCCCCCAACGCCGTCTGATCCCCCACCAAATTCACCTCCACCTCCTGCAGCAGAGCCTCCTCAATCCCCTCCCCCACAATCATCAAAACCACCTGAAAATCCCCCTCCGCCACCACCACCACCATCACAAGCAAACCCGCCGGACAATCCATCACCACCGCCACAACCCATAAACCCACCTGAGAGTTCACCCCCGCCCCCACCATCAGCACCTCCAGAAACCTCACCTCCCTCCCCAGCATCAATACCTCCTAGAAATTCACCGCCACCCCCAAGGCTTTCTCCCCCTCCCAGTGATCCCTCACCGTCAAGTCCTCCTCCCAATTCATCGCTACCCCCATCTCCACCACCTCCGCCGTCGCGTCTTTCTCCTCCATTACCTTCTAAACCCCCAACATTGCCGTCGGGGAATCGTACGGGCGATGGTTCTGGTTCTAATGATGGAGGAGCAAATTCTAATTCCAACAGCAATGGAGGAATCAGTAGTGGGGGTGTGATTGCCATTGGTGTAGCGGCAGGAATTGTAGTGCTTTTCATAATTGGATTTGTTGTATGGTACATCAGAAAGCCAAGGAAAAATGATTCTGGGCGTGGAGGTTACATTATGCCATCCTCTCTGGGTTCCTCTCCTAAGTCGGTTCATCAAGACATACATGCCACCGGCAGTGGCAGTGGGAGTGGCAGTGGTGGAATGTACACTCCAAGAGAGCCTGGTGGGCTGGGGAGTTCGAGGCCATTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTACTCAGAACCTCTTAGGAGAAGGAGGATTTGGTTCTGTTTATAAAGGATATCTTCCAGATGGAAGAGTGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGCCAAGGTGAGCTGGAATTCAAAGCTGAAGTCGAGATTATTGGTCGTGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTATTGTATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCTCTAACAATTCACTTTACTACCATCTTCATCTCAAAGGCAATGGTGAGCTCGTTCTGGAATGGGCAAAGCGCATTAAGATCGCAGCTGGTGCAGCCCGGGGCATTGCTTATCTTCATGAAGACTGTCATCCTCGAATTATCCACCGTGATATCAAATCCTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGAGTTTCAGACTTCGGGCTTGCCAAATTAGCTCTCGATGAACAAACTCATATAACAACCCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCAAGTGGAAAGTTAACCGAGAGATCAGATGTATTTTCTTTTGGAGTTGTACTTCTCGAGCTGATTACTGGTCGAAAGGCTGTGGATGCATCCCAACCAATGGGGAACGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTTAACCATGCACTCGACAATCAAGATTTCAAAAACTTGGTAGACCCAAGGCTTGAAAGGAACTATGACGAGAGTGAAATGTTGAGGATGATAGGAATAGCTGCTGCTTGCGTGCGCCACTCGTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGTTTAGCAACTGCAGATTTAAGTAATGGAATGAGATTTGGGGAGAGTCAAGGTTTCGACTCCGGTCAACAATCTGCTGAAATTAGATTTTTCCGAATGCTGGCATTCGGTAACCAAGATTACAGTTCAAATTTTTATAGCCAAGGTAGCTCAAATGCCTGA | 2124 | 49.95 | MASVSPAPFSSPSPASPSTPSLLPPAASNSPPSTPSPSPPQQSPPSNQSDNATPSSSPPPPSHQPSATSPPPTSETPPPSTPALSHPPPPTVPPATPSPTPPNAPPPTTPDPPSPVSSTPPTPSDPPPNSPPPPAAEPPQSPPPQSSKPPENPPPPPPPPSQANPPDNPSPPPQPINPPESSPPPPPSAPPETSPPSPASIPPRNSPPPPRLSPPPSDPSPSSPPPNSSLPPSPPPPPSRLSPPLPSKPPTLPSGNRTGDGSGSNDGGANSNSNSNGGISSGGVIAIGVAAGIVVLFIIGFVVWYIRKPRKNDSGRGGYIMPSSLGSSPKSVHQDIHATGSGSGSGSGGMYTPREPGGLGSSRPLFTYEELFKATNAFSTQNLLGEGGFGSVYKGYLPDGRVVAVKELKIGGGQGELEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVSNNSLYYHLHLKGNGELVLEWAKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGYVAPEYASSGKLTERSDVFSFGVVLLELITGRKAVDASQPMGNESLVEWARPLLNHALDNQDFKNLVDPRLERNYDESEMLRMIGIAAACVRHSSAKRPQMGQVVRAFDSLATADLSNGMRFGESQGFDSGQQSAEIRFFRMLAFGNQDYSSNFYSQGSSNA* | 708 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 16036981 | 16040474 | + | Chy10G182920.1 | Chy10g01098 | 235473 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g01098 | 707 | PRINTS | Pistil-specific extensin-like signature | 121 | 139 | IPR003882 | - | |
Chy10g01098 | 707 | PRINTS | Pistil-specific extensin-like signature | 236 | 257 | IPR003882 | - | |
Chy10g01098 | 707 | PRINTS | Pistil-specific extensin-like signature | 88 | 111 | IPR003882 | - | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 315 | 356 | - | - | |
Chy10g01098 | 707 | PANTHER | BNACNNG34790D PROTEIN | 100 | 704 | - | - | |
Chy10g01098 | 707 | Gene3D | Transferase(Phosphotransferase) domain 1 | 454 | 667 | - | - | |
Chy10g01098 | 707 | Gene3D | Phosphorylase Kinase; domain 1 | 359 | 453 | - | - | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 10 | 44 | - | - | |
Chy10g01098 | 707 | Pfam | Protein kinase domain | 379 | 649 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy10g01098 | 707 | ProSiteProfiles | Protein kinase domain profile. | 378 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy10g01098 | 707 | ProSitePatterns | Protein kinases ATP-binding region signature. | 384 | 406 | IPR017441 | GO:0005524 | |
Chy10g01098 | 707 | SMART | serkin_6 | 378 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 324 | 348 | - | - | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 1 | 274 | - | - | |
Chy10g01098 | 707 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 100 | 704 | - | - | |
Chy10g01098 | 707 | CDD | STKc_IRAK | 384 | 656 | - | - | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 54 | 251 | - | - | |
Chy10g01098 | 707 | SUPERFAMILY | Protein kinase-like (PK-like) | 362 | 657 | IPR011009 | - | |
Chy10g01098 | 707 | MobiDBLite | consensus disorder prediction | 252 | 274 | - | - | |
Chy10g01098 | 707 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 500 | 512 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00904 | Chy-Chr10:14739630 | Chy10g01098 | Chy-Chr10:16036981 | 4.29E-156 | dispersed | |
Chy10g01098 | Chy-Chr10:16036981 | Chy11g00389 | Chy-Chr11:3684568 | 3.63E-131 | dispersed | |
Chy10g01098 | Chy-Chr10:16036981 | Chy09g00148 | Chy-Chr9:1259517 | 1.17E-174 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71517 | PF00069 | Pkinase | 1.60E-43 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g01098 | - | - | cmo:103489228 | 808.905 |