Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01100 ATGGGCGGTGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTCTGTAACGAACCAGAGTGTTTTGAGGCAGAAATTCGAAACTACATAGACAATCGTATTAGTACTACTAAGTATACTCTAGCTACTTTCCTGCCTAAGTCATTGTTTGAGCAATTCAGGAGGGTGGCCAATTTCTATTTTTTGGTCAGTGGGATTCTCGCTTTTACTCCTCTTGCTCCTTACACGGCTGTCAGTGCGATCATCCCTCTTATTCTTGTCATTTCGGCCACAATGATCAAAGAAGGGATTGAGGATTGGAGGCGGAAAAAACAGTTAATAGGGGTTTGGGTTAAACAAGAAAACATCCATAAATGA 435 42.3 MGGGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAEIRNYIDNRISTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAIIPLILVISATMIKEGIEDWRRKKQLIGVWVKQENIHK* 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16050399 16051123 - Chy10G182940.1 Chy10g01100 235475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01100 144 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Chy10g01100 144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 143 - -
Chy10g01100 144 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 132 IPR023298 -
Chy10g01100 144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01100 Chy-Chr10:16050399 Chy01g00320 Chy-Chr1:2298426 2.44E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01100 K01530 - csv:101207148 270.011