Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01104 ATGCCGTCGCCTTCGATCCTACCTATCACCCAACCCCCTTCTTCCTCTCCATTTTCCTCTGGGGGCTCCGTCACCAATTCGATTATGGCAACTACATCTACTGCCATAGACATTATGTTGCTTAAAGAAGACGATGAACATAGGACTGGAGTTCTTGTTTCTCCATTGTTCGATGACGATAGGTCGATAGGTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCAACTTCCTCTTCCGGCAGCACTATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGAATTTTTATCTTTTCTCTCCGGTGACGGCCGCCACCAGACTTTTGATCATGATGTGGAGAATGCCGATGTTGAGAGAGCTGAAAGATTTCTACTGACCCGTTTGGGTTTGAAACTCTCAAAATATATTCGGGTAGCATTTAGATGGATTGCAAGATTTCTGGCACTTGGTTGCTATTCATTTTTTCTTCTTCCAGGTTTTCTTCAAGTTGGTTATTATTATTTCTCTTCCAGCCAGATACGCAGAAGTATTCCTTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGCCCAAAACCAGTTGTTGCTTTTATCACTGGCGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCTTGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTGATGATGCCTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGAGCACATATAGCTGCCTGCACGCTTTTGGAGCATGCAATGAAAGAGGTTCGCAGAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATTTGGTAGATTACTTTAACTCTCGAGGTCTATCTCGTTCTCTGTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAGGTAATGATCTTGGAAGAACCCAACATAGGAGCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGACTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCATTGAGGGGTGGGAGAGACCAAATGTTTGAAGATCTTGTTGCTATCATCCATGCCAATGACGCCGAAGCACTGGCAAAAGATGCAGTAGCACCTCCAAGAAGACGATTTGTACCCGAGATCATGTTGATGTTAGCTCGTAGTGTTAGCCCCTTCTAA 1440 42.78 MPSPSILPITQPPSSSPFSSGGSVTNSIMATTSTAIDIMLLKEDDEHRTGVLVSPLFDDDRSIGHKPLLPRTSSYASSTSTSSSGSTMYKQKRRRVKSEEFLSFLSGDGRHQTFDHDVENADVERAERFLLTRLGLKLSKYIRVAFRWIARFLALGCYSFFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRRVESISWSVSQIKAYFGLSGGYNLLNLVDYFNSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGAAVSILPPIILFHGTADYSIPSDASKTFAETLQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEIMLMLARSVSPF* 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16086835 16090739 + Chy10G182980.1 Chy10g01104 235479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01104 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Chy10g01104 479 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 109 469 - -
Chy10g01104 479 Pfam BD-FAE 193 403 - -
Chy10g01104 479 MobiDBLite consensus disorder prediction 71 89 - -
Chy10g01104 479 MobiDBLite consensus disorder prediction 68 94 - -
Chy10g01104 479 PANTHER ARYLACETAMIDE DEACETYLASE 109 469 - -
Chy10g01104 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Chy10g01104 479 MobiDBLite consensus disorder prediction 1 23 - -
Chy10g01104 479 SUPERFAMILY alpha/beta-Hydrolases 181 445 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00602 Chy-Chr5:7195219 Chy10g01104 Chy-Chr10:16086835 3.15E-140 dispersed
Chy06g01396 Chy-Chr6:14475079 Chy10g01104 Chy-Chr10:16086835 8.24E-177 dispersed
Chy10g01104 Chy-Chr10:16086835 Chy08g00985 Chy-Chr8:17078166 5.93E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01104 K15889 - csv:101206426 920.613