Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy10g01131 | ATGAGGACAAAAAGAACGCCTACCATTAACCTTGATCCAATTCCAAGTTTTGAAGAACATGTTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTGATTAGAGTTTACGAAAATGGGTGTGTGGAAAGACCCCAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCGGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAACTGAACAACATTTGGGCTCGTTTCTATATTCCGACACAGTGCCAGGAGAAGCTGCCTTTGATTGTATACTTCCATGGAGGTGGGTTTTGTGTTGGCTCGGCCGCTTGGAGTTGCTACCATGAGTTCCTGGCCAAGCTCTCTGCAAAAGCTAACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCCCTTCCTGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGGCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGTGGCAACATAGCCTTCAATGTAGCTGCCAGACATGGTGGCAAGACGACTGCTTCTGGAGCTGTGATTTTGAAACCGTTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGTGGAGAGTCGAGGACCAAGTCAGAGAAGTTCCTTGTCCAACCTCCTCGTTCCCCACTGACGTTGGGGATTTCCGATACGTACTGGCGGCTGGCATTGCCTTCCGGAACAAACCGTGACCACCCATGGTGCAATCCTTCTACAAAAGGATTGTTTACGGTGGAGAATTTGAGGGTTTTGCCTAGTTTGATATGCATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGAGCGGGTAAGCTGATCAATTATGTGGTTTACGAAGGAGTTGGCCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGATTGATCATATCAAAGATTTCTTGTGTGTATAG | 1056 | 44.51 | MRTKRTPTINLDPIPSFEEHVNGFDQHDVLVEEIEGLIRVYENGCVERPQIVPCVSNALPPELGVTSWDVVVDKLNNIWARFYIPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKANCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGGKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARHGGKTTASGAVILKPLVIKGSILIQPFFGGESRTKSEKFLVQPPRSPLTLGISDTYWRLALPSGTNRDHPWCNPSTKGLFTVENLRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMIDHIKDFLCV* | 352 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 16272106 | 16273161 | + | Chy10G183250.1 | Chy10g01131 | 235506 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy10g01131 | 351 | PANTHER | CARBOXYLESTERASE 6-RELATED | 20 | 349 | - | - | |
| Chy10g01131 | 351 | Pfam | alpha/beta hydrolase fold | 95 | 326 | IPR013094 | GO:0016787 | |
| Chy10g01131 | 351 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 177 | 189 | IPR033140 | - | |
| Chy10g01131 | 351 | Gene3D | alpha/beta hydrolase | 48 | 350 | IPR029058 | - | |
| Chy10g01131 | 351 | PANTHER | ARYLACETAMIDE DEACETYLASE | 20 | 349 | - | - | |
| Chy10g01131 | 351 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 349 | IPR029058 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy03g00856 | Chy-Chr3:11799979 | Chy10g01131 | Chy-Chr10:16272106 | 1.34E-60 | dispersed | |
| Chy07g00924 | Chy-Chr7:13185641 | Chy10g01131 | Chy-Chr10:16272106 | 1.25E-122 | dispersed | |
| Chy08g00985 | Chy-Chr8:17078166 | Chy10g01131 | Chy-Chr10:16272106 | 3.54E-55 | dispersed | |
| Chy10g01131 | Chy-Chr10:16272106 | Chy09g00100 | Chy-Chr9:842222 | 1.07E-48 | dispersed | |
| Chy11g00446 | Chy-Chr11:4438312 | Chy10g01131 | Chy-Chr10:16272106 | 3.14E-39 | dispersed | |
| Chy10g01131 | Chy-Chr10:16272106 | Chy03g01517 | Chy-Chr3:17482012 | 6.40E-52 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy10g01131 | - | - | csv:101213887 | 708.753 |