Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01165 ATGGAATCATCTTCCACAATCCTTCCCTTGGAATCTCCTATACTCATCTTTCTCTTCTTCCACAAGGCTATACGCGCTGAGCTTGATCACTTTCATACCGACGCTGTCCAATTTGCCACTAATAACCAAACTGCTGGGGATATTGCTCCCTTGTTGCACCGCTACCACTTCCTTCGAGCTGTTTATAAGCACCACTGTAAAGCTGAGGACGAGGTCATCTTCCCGGCTCTAGATCTGCGAGTGAAAAATGTGGCAACTACTTATTTCCTTGAACATGAAGGTGAAAGTGTTCTGTTTTGCCAATTGTTCGAGCTTCTGAATTCAAATGGGTTGGAGGAAGGAAGCTATAAGAGGGAGCTGTCATCTCGTGTTAAAGCTCTTCAGATATCAATATGCCAGCATATGTTCAAGGAAGAGGAACAGGTGTTCCCGTTACTTACTAAGAAGTTTTCTTTTGAAGAACAAGCAGCATTAGTATGGAAATTTCTTTGTAGTATACCTATTAATATGCTGGTAGTCTTTCTTCCGTGGATTTCTTCCTCTATATCTCCAGATGAGCATCAGATTATGTGCAAATGCTTGAGTAAAATTATCCCTGAGAAAAAGCTTCTTCAGAAGATAATATTTTCATGGATGGAGGGTGCAAAAACAGCTCATGCCAATCAAAGTTCGTATGATGACAATTTAGAGTTTCAATCTCTAGGCTCTCAGGTCCATGATCTTATATGTATGCCAGAGAAGGGGAGTGACGCTTCTGAATCAACTAGAATTGGTAAAAGGAAATACGTGGAGCAAAGTAATTTTACTTATTCTACTGTTTCAGATGCTTGCCCTATCAATGAAATATTATATTGGCATAATGCTATAAGAAAAGAACTAAATTGCATCGCTGAGGCAGCTAGGAACCTACCTCTGTCTTCTGATTTTTCTGAGTTATCTGCACTTAAGGAGAGGCTGCAGTTTATCACAGAAGTCTGCATCTTCCACTGCATTGCTGAGGATAAAGTTATATTCCCTGCTGTAGATGCTGAACTATCTTTTGCTGATCAGCATGCAGAAGAAGAGATTCAATTTGATAAGCTTAGGCATTTGATTGAATGTATCCAAGCTGATAAAGTTAAGTGTTCTTCTGCTGAAATTCATAAAAAGTTAAGTTCTCATGCCGATCAAATTATCAAGACCATCCAGAAGCACTTCCATGATGAGGAAATGCATGTCCTTCCACTTGCTTGTAAGCATTTTGGACACCAAAGGCAGCGAGAACTTCTGTATCACAGCTTATGCATAATGCCCCTGAAATGGATAGAACGAATCTTACCTTGGTTGGTAGAAACTCTTACTGAAAAAGAAGCAAGATCTTTTCTTCAGAATATGCAAATGGCAGCTCCAGTGTCGGATCATGCACTTGTTACACTATTTTCTGGTTGGGCATGCAAAGGCCGACCCAGGAGCATTTGTTTATCTGTAAGTGCTATTGACCGTTGTCCTGAACTGATATTGGCTGGGGATGAAGAATCATGCTCCTCCTTTTGTTCTGCCAGTGAAAAACATTCATGCAATCTGGCAACTGAGTGTGCTAGGTCATCCAAGGGTGGGAAGGCAGTATGCCATGGCGACTCAAATGGCCGTCTTCCTTTGAAAAACCCAAGCAAAAAACTTCAAATCACTCGTGTAAAACGATCTTCTTGTGTCCCCGGGTTAGGAGTGGATCATGACAATAATTTAGGAATGAGATCTATGGCAGCAACAAAATCACTGCATTCTTTGTGTTTTGGTCTCTATGCTCCTTCTCTCAACTCCAGTCTTTTTAGTCTGGAAACGGATCCAGTCTCTCTTGGCAGTGGTTCTAACCCACAGCCTATTGATAACATATTTACATTTCATAAAGCAATAAGGAAAGACTTGGAGTATTTGGATAATGAATCTGTGAATCTCGGTGATTGCAATGATACTTTCTTTAGGCAATTTTGCGGTAGGTTTTATCTATTATGGGGCCTATATAAAGCTCATAGTAATGCAGAGGATGATATAGTATTTCCTGCATTAGAATCAAAAGAAGCTCTTCATAACGTGAGTCACTCTTATACATTAGACCACAAACAAGAGGAAGAGCTCTTTGAAGGTATTTCTAGTGCACTATCTAAGCTGGCAGACCTGCGCAGAGACTTGAAAGGTAATAAAAAGTGTAATAATTCAAGTTGCATGAAGTTTCATACCTCTGATAGTTGTGATACTGTGAGAATGAATATTGAGCTGGCAACAAAGCTCCAGGGCATGTGCAGATCAATTCGAGTTACACTTGACCAGCATATTTTCCGTGAGGAATCAGAATTGTTGCCGTTGTTCCATACATATTTTTCTCTGGATGAACAGGATAAAATTGTTGGTAGAATAATTGGTACTACAGGTGCTGAGGTCCTTCAATCAATGTTGCCTTGGGTAACTTCTGCACTTACTCAGGAGGAGCAAAATATGATGATGGATACATTGAAGCAGGCAACCAGGAATACAATGTTTAGTGACTGGCTAAATGAATGGTGGGAAGAACCTGCTACATCTCCACATCACGACGAATCTGTCATTCATTTATCTGGAGGTTCTAATTCCCATGGCGGCTGTGACCAAAAAAATGATTCGATTTTCAAGCCAGGGTGGAAAGAGATATTTAGGATGAATGAAAATGAACTCGAGTCAGAAATAAGAAAGGTTGTCAAGGATTCAACCATTGACCCCAGGAGAAAAGATTATCTTATCCAGAACTTGATGACCAGTCGTTGGATAGCTTCACAGCAAATGCTACCCCAAGCTACTACAGGTGAAAACACAAATGCAAGAGATCTAATTGCAATTGCCCCATCATTTCGCGATCCTAAGGAACAGATTTTTGGGTGTGAGCATTATAAAAGAAATTGCAAACTGCTTGCAACTTGTTGTGGCAAGTTGTTTACTTGTAGTTTCTGTCATGATAAAGTCAGTGATCATTCAATGGATAGGAAGGCTTCAACTGAAATGATGTGTATGCAATGCCTCAAAGTTCAGCCTATTGGATCTGTTTGTACAACACCATCCTGCGGTGGTCTCTCTATGGGGAAGTACTACTGTGGTATTTGCAAAGTTTTTGACGATGAAAGGGAAGTTTATCATTGTCCTTTTTGCAATCTATGTCGTCTTGGGAAGGGACTTGGTACTGATTTTTTCCATTGTATGACATGCAACTGTTGTTTAGCAATGAAGTTGGTTGATCACAAATGCCAGGAGAAGGGCCTAGAGACAAATTGCCCTATCTGCTGTGATTTTTTGTTCACGTCTAGTGAAAGTGTTAGAGCTCTCCCTTGTGGCCATTTCATGCATTCGGCTTGTTTCCAGGCTTACACTTGTAGCCACTACATATGCCCAATATGTAGCAAGTCCTTGGGAGATATGACGGTATACTTTGGCATGCTTGACGCGTTACTGGCATTGGAAGTACTTCCTGAGGAATACAGGGAACGCTGTCAGGATATATTGTGCAACGATTGCTCCATGAAGGGGGAAGCGCGGTTCCATTGGCTCCACCATAAATGTGGAAGTTGTGGATCTTACAATACCAAGGTGATTAAGGTTAGCTCAAGTTCCTGCTCAACAATGACTTTATAA 3636 40.79 MESSSTILPLESPILIFLFFHKAIRAELDHFHTDAVQFATNNQTAGDIAPLLHRYHFLRAVYKHHCKAEDEVIFPALDLRVKNVATTYFLEHEGESVLFCQLFELLNSNGLEEGSYKRELSSRVKALQISICQHMFKEEEQVFPLLTKKFSFEEQAALVWKFLCSIPINMLVVFLPWISSSISPDEHQIMCKCLSKIIPEKKLLQKIIFSWMEGAKTAHANQSSYDDNLEFQSLGSQVHDLICMPEKGSDASESTRIGKRKYVEQSNFTYSTVSDACPINEILYWHNAIRKELNCIAEAARNLPLSSDFSELSALKERLQFITEVCIFHCIAEDKVIFPAVDAELSFADQHAEEEIQFDKLRHLIECIQADKVKCSSAEIHKKLSSHADQIIKTIQKHFHDEEMHVLPLACKHFGHQRQRELLYHSLCIMPLKWIERILPWLVETLTEKEARSFLQNMQMAAPVSDHALVTLFSGWACKGRPRSICLSVSAIDRCPELILAGDEESCSSFCSASEKHSCNLATECARSSKGGKAVCHGDSNGRLPLKNPSKKLQITRVKRSSCVPGLGVDHDNNLGMRSMAATKSLHSLCFGLYAPSLNSSLFSLETDPVSLGSGSNPQPIDNIFTFHKAIRKDLEYLDNESVNLGDCNDTFFRQFCGRFYLLWGLYKAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEELFEGISSALSKLADLRRDLKGNKKCNNSSCMKFHTSDSCDTVRMNIELATKLQGMCRSIRVTLDQHIFREESELLPLFHTYFSLDEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNMMMDTLKQATRNTMFSDWLNEWWEEPATSPHHDESVIHLSGGSNSHGGCDQKNDSIFKPGWKEIFRMNENELESEIRKVVKDSTIDPRRKDYLIQNLMTSRWIASQQMLPQATTGENTNARDLIAIAPSFRDPKEQIFGCEHYKRNCKLLATCCGKLFTCSFCHDKVSDHSMDRKASTEMMCMQCLKVQPIGSVCTTPSCGGLSMGKYYCGICKVFDDEREVYHCPFCNLCRLGKGLGTDFFHCMTCNCCLAMKLVDHKCQEKGLETNCPICCDFLFTSSESVRALPCGHFMHSACFQAYTCSHYICPICSKSLGDMTVYFGMLDALLALEVLPEEYRERCQDILCNDCSMKGEARFHWLHHKCGSCGSYNTKVIKVSSSSCSTMTL* 1212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16507098 16513929 - Chy10G183590.1 Chy10g01165 235540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01165 1211 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 10 1206 - -
Chy10g01165 1211 CDD RING-H2_Pirh2 1092 1135 - -
Chy10g01165 1211 Pfam Hemerythrin HHE cation binding domain 18 146 IPR012312 -
Chy10g01165 1211 Pfam Hemerythrin HHE cation binding domain 281 410 IPR012312 -
Chy10g01165 1211 Pfam Hemerythrin HHE cation binding domain 620 781 IPR012312 -
Chy10g01165 1211 Pfam CHY zinc finger 964 1039 IPR008913 GO:0008270
Chy10g01165 1211 Gene3D nmb1532 protein domain like 616 840 - -
Chy10g01165 1211 ProSiteProfiles Zinc finger CHY-type profile. 957 1026 IPR008913 GO:0008270
Chy10g01165 1211 ProSiteProfiles Zinc finger RING-type profile. 1093 1135 IPR001841 -
Chy10g01165 1211 CDD Hr-like 624 780 - -
Chy10g01165 1211 SMART ring_2 1093 1134 IPR001841 -
Chy10g01165 1211 ProSiteProfiles Zinc finger CTCHY-type profile. 1029 1092 IPR017921 -
Chy10g01165 1211 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1-LIKE 10 1206 - -
Chy10g01165 1211 Gene3D nmb1532 protein domain like 11 164 - -
Chy10g01165 1211 Gene3D nmb1532 protein domain like 281 425 - -
Chy10g01165 1211 CDD Hr-like 16 144 - -
Chy10g01165 1211 SUPERFAMILY RING/U-box 1092 1139 - -
Chy10g01165 1211 SUPERFAMILY CHY zinc finger-like 957 1020 IPR037274 GO:0008270
Chy10g01165 1211 Pfam Ring finger domain 1092 1134 IPR001841 -
Chy10g01165 1211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1088 1137 IPR013083 -
Chy10g01165 1211 SUPERFAMILY Zinc hairpin stack 1030 1085 IPR037275 -
Chy10g01165 1211 Pfam Zinc-ribbon 1140 1196 IPR039512 -
Chy10g01165 1211 Gene3D - 1164 1206 - -
Chy10g01165 1211 CDD Hr-like 281 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02526 Chy-Chr2:28617235 Chy10g01165 Chy-Chr10:16507098 2.50E-11 dispersed
Chy08g00879 Chy-Chr8:16182841 Chy10g01165 Chy-Chr10:16507098 4.50E-47 dispersed
Chy10g01165 Chy-Chr10:16507098 Chy11g00847 Chy-Chr11:11956039 1.69E-53 dispersed
Chy10g01165 Chy-Chr10:16507098 Chy02g02353 Chy-Chr2:27414126 6.21E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01165 K16276 - csv:101217252 2449.47