Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01166 ATGGCGGCTTCTACTTCGCTGTCGCATTTTGCTTGTTTTGTATCTTTCCTCTACTTTACATGTGTTTATGCCTCTTCGAACATAGATTTAGATGCTTTAGTGGCGTTCAAAGTAGCTTCTGATAAAGGGAATAAGCTAACCACATGGAACTCTACTTCTAACCCATGTGCTTGGGATGGTGTTTCTTGCCTCAGAGACAGGGTCTCGAGGTTGGTTCTTGAGAACCTTGATCTTACAGGCTCTATCGGACCTCTTACTGCTTTGACTCAGTTACGAGTTCTGAGTCTCAAGCGGAACCGTCTCTCTGGTCCCATTCCCGATCTCTCCAACTTCAAAGCTCTCAAACTTGTATTTCTTTCCTACAATGCATTTTCTGGTAACCTCCCGGCTTCTCTTCTGTCCCTCGTCCGGCTTTACCGTCTCGATCTCTCTCACAATAACCTGACCGGAGAGATACCGGCTTCTGTTAACCGTCTGACTCATCTTCTTACTCTCCGGCTCGAAGATAACCGGTTTTCTGGACCCATTTTGGAACTGAACCTTCCGAATCTTCAGGACCTCAATATTTCGGAGAATCGTCTCTCCGGCGAAATCCCCAAATCGTTGTCGGCATTTCCTGAGTCTTCTTTTGGACAGAACATGGGTTTATGTGGATCTCCTCTTCAGAGTTGCAAGAGCATTGTCAGTAAACCGACGGAACCTGGATCAGAAGGGGCAATTGCTTCACCCATTACACCGCCACGGAACCTCACGGTTTCATCTTCTCCGACTTCCCTTCCCGAAGTTACAGCTGAAACAAAGCCGGAAAATACCCACCATCATGGCACGGGAAAGATAGGTTCTCTAGCTTTAATCGCTATAATTCTTGGCGACGTTGTGGTGTTAGCGTTGGTCTCGCTTCTTCTCTACTGCTATTTTTGGAAAAACTCTGCTGATAAAGCCCGAGAAGGTAAGGGCTCGTCGAAGCTTCTTGAGAGCGAGAAGATTGTTTACTCTTCTAGTCCATATCCGGCTCAGGCCGGAACTGAGAGAGGCCGAATGGTGTTCTTCGAGGGAGTCAAGAAGTTTGAGCTCGAAGATTTGCTTCGAGCCTCTGCAGAAATGCTCGGAAAAGGTGGGTTCGGTACTTCGTACAAGGCGATTCTGGACGACGGAAATGTGGTGGCGGTGAAACGGCTGAAAGATGCGCAGGTTGGAGGGAAACGAGAGTTCGAGCAGCACATGGAAGTTTTGGGAAGGTTAAGACATGCAAATATTGTAAGCTTGAGAGCTTACTATTTTGCTAGAGAGGAGAAGTTATTGGTATATGATTACATGCCCAATGGCAGCTTGTTCTGGCTTCTTCATGGAAACAGAGGCCCTGGACGGACGCCGTTGGATTGGACGACGAGGTTGAAGATCGCCGCCGGAGCAGCTAGAGGATTGGCTTTTATTCACAATTCCTGCAAGTCCCTCAAGCTCGCACATGGCAATGTTAAATCCACCAACGTTCTTTTGGACCAATCCGGAAACGCTCGAGTCTCTGATTTCGGATTGTCCCTTTTCACTCCCCCTTCCACTCCCAGAACCAACGGCTACCGTGCGCCGGAATGCGGTGATGACCGAAAACTGACGCAGAAATCCGACGTGTACTCATTTGGGGTTCTTCTCCTTGAGTTGCTGACAGGAAAATGCCCCTCCGTCGTGGAGAACGGCGGGCCAGGAGGCGGTGGATACGGCAGCGTATTGGATTTGCCACGATGGGTTCAGTCAGTGGTGCGAGAGGAATGGACGGCGGAGGTTTTTGATTTGGAGCTGATGAGATACAAAGACATCGAAGAGGAAATGGTGGGGCTTCTGCAGATTGCCTTGGCTTGTACAGCCGCTTCGCCAGATCAACGGCCAAAGATGAACCACGTGGTGAAGATGATCGACGAGCTCCGTGGGGTAGAGGTGTCGCCGTTCCATGACGGGTCTGACTCAGTGACGGAATCGCCGTCGGTGTCGGAGGGAACATGCGGCGGAGGAGGCAGTCAGTAA 2019 49.83 MAASTSLSHFACFVSFLYFTCVYASSNIDLDALVAFKVASDKGNKLTTWNSTSNPCAWDGVSCLRDRVSRLVLENLDLTGSIGPLTALTQLRVLSLKRNRLSGPIPDLSNFKALKLVFLSYNAFSGNLPASLLSLVRLYRLDLSHNNLTGEIPASVNRLTHLLTLRLEDNRFSGPILELNLPNLQDLNISENRLSGEIPKSLSAFPESSFGQNMGLCGSPLQSCKSIVSKPTEPGSEGAIASPITPPRNLTVSSSPTSLPEVTAETKPENTHHHGTGKIGSLALIAIILGDVVVLALVSLLLYCYFWKNSADKAREGKGSSKLLESEKIVYSSSPYPAQAGTERGRMVFFEGVKKFELEDLLRASAEMLGKGGFGTSYKAILDDGNVVAVKRLKDAQVGGKREFEQHMEVLGRLRHANIVSLRAYYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHNSCKSLKLAHGNVKSTNVLLDQSGNARVSDFGLSLFTPPSTPRTNGYRAPECGDDRKLTQKSDVYSFGVLLLELLTGKCPSVVENGGPGGGGYGSVLDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIALACTAASPDQRPKMNHVVKMIDELRGVEVSPFHDGSDSVTESPSVSEGTCGGGGSQ* 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16515367 16517886 - Chy10G183600.1 Chy10g01166 235541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01166 672 Pfam Protein tyrosine and serine/threonine kinase 367 636 IPR001245 GO:0004672|GO:0006468
Chy10g01166 672 MobiDBLite consensus disorder prediction 651 672 - -
Chy10g01166 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 655 - -
Chy10g01166 672 PRINTS Leucine-rich repeat signature 138 151 - -
Chy10g01166 672 PRINTS Leucine-rich repeat signature 181 194 - -
Chy10g01166 672 Gene3D Ribonuclease Inhibitor 27 178 IPR032675 -
Chy10g01166 672 Gene3D Ribonuclease Inhibitor 179 226 IPR032675 -
Chy10g01166 672 ProSiteProfiles Protein kinase domain profile. 363 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01166 672 SUPERFAMILY Protein kinase-like (PK-like) 367 637 IPR011009 -
Chy10g01166 672 MobiDBLite consensus disorder prediction 232 275 - -
Chy10g01166 672 MobiDBLite consensus disorder prediction 246 265 - -
Chy10g01166 672 Gene3D Phosphorylase Kinase; domain 1 338 438 - -
Chy10g01166 672 MobiDBLite consensus disorder prediction 647 672 - -
Chy10g01166 672 CDD STKc_IRAK 369 640 - -
Chy10g01166 672 Gene3D Transferase(Phosphotransferase) domain 1 439 651 - -
Chy10g01166 672 SUPERFAMILY L domain-like 45 204 - -
Chy10g01166 672 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Chy10g01166 672 PANTHER - 23 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00898 Chy-Chr2:5795819 Chy10g01166 Chy-Chr10:16515367 2.07E-28 dispersed
Chy04g01978 Chy-Chr4:25649898 Chy10g01166 Chy-Chr10:16515367 1.24E-111 dispersed
Chy06g01272 Chy-Chr6:11694990 Chy10g01166 Chy-Chr10:16515367 2.02E-135 dispersed
Chy07g00849 Chy-Chr7:11055030 Chy10g01166 Chy-Chr10:16515367 1.91E-106 dispersed
Chy10g01166 Chy-Chr10:16515367 Chy11g01173 Chy-Chr11:17853820 1.58E-157 dispersed
Chy11g01830 Chy-Chr11:24658353 Chy10g01166 Chy-Chr10:16515367 1.82E-42 dispersed
Chy12g01586 Chy-Chr12:19388379 Chy10g01166 Chy-Chr10:16515367 1.35E-101 dispersed
Chy10g01166 Chy-Chr10:16515367 Chy10g01174 Chy-Chr10:16557729 9.02E-86 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71519 PF07714 PK_Tyr_Ser-Thr 4.20E-34 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01166 - - csv:101217010 1302.35