Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01167 ATGGCTTCCAGAGAAGGAAGACGTCATCATAATCATCGTCATCACAATCTGGTGCCTCTTGCTGCTTTGATTAGTAAAGAGGTGAGGAGTGAGAGATTGGAGAAACCGACTGTAAGATATGGGAATGCAGCGCAGTCTAGAAAAGGGGAAGACTACTTTCTCATGAAAACTGATTGTCAGCGAGTTCCTGGGAACCCTTCATCCACTTTCTCAGTATTTGCTATATTTGATGGACACAATGGAAATGCTGCAGCAATTTTCACGAGGGAACATTTGTTGAGTCATGTCTTGGGTGCACTTCCCCGTGGTCTCGGGCAGGAGGAGTGGCTTCAAGCTCTACCACGAGCTTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAGAGCAGAGGTGAAACTTCTGGAACTACAGCTACATTTGTGATCATCGATGGATGGACGGTAACAGTAGCGTCAGTTGGCGATTCTCGATGTATTTTAGATACTCAAGGTGGTGCTGTCTCTGCTTTAACGGTTGATCATCGACTTGAAGAGAATGTTGAAGAGAGAGAACGTGTGACTGCAAGCGGTGGGGAAATTGGAAGATTAAGTATTGTTGGCGGTGCTGAGATCGGCCCACTCCGTTGTTGGCCAGGAGGCTTATGCCTTTCTCGATCCATTGGAGACATGGATGTTGGGGAATTTATAGTTCCAATTCCATTTGTGAAACAAGTAAAGTTACCAAATGCAGGTGGGAGGCTTATAATCGCTTCTGACGGCATCTGGGATGCCTTATCATCAGATATGGCTGCAAAGTCCTGCCGTGGACTACCGGCAGAGCTTGCTGCTAGGCAAGTTGTGAAGGAAGCCTTGAGAACAAGAGGTTTAAAAGATGATACAACCTGCATAGTTGTAGACATCATTCCTCCTGATAATTCAGCACAGTCTTCCCCTCTTCCAAAGAAACAAAGCGTACTGAAATCTCTATTATTTAGGAAAAAGTCTCCCAGTTCTAATAAGTTATCGAAGAGGCTTTCGGCTATAGGTTTCGTGGAAGAATTATTCGAAGATGGCTCTGCTATGCTGGCTGAAAGGCTTGGAACTGTAGAGTTGAGTGGATCTGGACATGGGACACCAAACATGTTCACTTGTGTTGTATGTCAAGTAGATCTTGCTCCCAGTGAGGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCAAAGCCATGGCAAGGGCCTTTCCTTTGTGCCGATTGTCGAAACAAGAAGGATGCCATGGAAGGAAAACGTCCCAGCGGGGTAAGAGTGGCCTAG 1302 46.16 MASREGRRHHNHRHHNLVPLAALISKEVRSERLEKPTVRYGNAAQSRKGEDYFLMKTDCQRVPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCILDTQGGAVSALTVDHRLEENVEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPFVKQVKLPNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNSAQSSPLPKKQSVLKSLLFRKKSPSSNKLSKRLSAIGFVEELFEDGSAMLAERLGTVELSGSGHGTPNMFTCVVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA* 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16522126 16524666 - Chy10G183610.1 Chy10g01167 235542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01167 433 Pfam Protein phosphatase 2C 65 286 IPR001932 -
Chy10g01167 433 PANTHER ALPHABET, ISOFORM E-RELATED 8 433 - -
Chy10g01167 433 SMART PP2C_4 29 299 IPR001932 -
Chy10g01167 433 SMART PP2C_SIG_2 34 301 IPR001932 -
Chy10g01167 433 Gene3D - 36 308 IPR036457 -
Chy10g01167 433 SUPERFAMILY PP2C-like 46 301 IPR036457 -
Chy10g01167 433 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 8 433 - -
Chy10g01167 433 CDD PP2Cc 48 301 IPR001932 -
Chy10g01167 433 ProSiteProfiles PPM-type phosphatase domain profile. 32 301 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00121 Chy-Chr7:1044965 Chy10g01167 Chy-Chr10:16522126 6.68E-173 dispersed
Chy08g01062 Chy-Chr8:17744725 Chy10g01167 Chy-Chr10:16522126 0 dispersed
Chy10g01167 Chy-Chr10:16522126 Chy02g00083 Chy-Chr2:534855 5.45E-26 dispersed
Chy10g01167 Chy-Chr10:16522126 Chy04g00256 Chy-Chr4:2272719 1.93E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01167 - - csv:101216777 839.721