Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01231 ATGGGTGTTCCTGCAACTGCAACTGCAGCTTTGGGGGATGATTTTCTCAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATTCTTGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACTAATTCAATTCGTAAAGCTCACGAAAACATTGATAAGACTTTGAAGTCTGCGGAGGTTATTTTAACACAATTTGATCTCTCTCGTCAGGCAGAAACAAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCGATTGGTCAATTAAGAAACATCATCAAATTTTTTAGCAGCCATAAAGGTTTTAAGAGTAGCGAGGTAGTACTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGATTCTCCTGGTCATGATTCAGGTGGAAAGAATCATCATTCTGCTCATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCACTCTCATACCACCACGAGTTCTACCACTGCTGCACGATTTATCGCAGCAAATGGTTCAAGCTGGTCACCAACAACAAATTTTAAAAGTCTACAGGGACACCCGTTCAGTCGTCCTGGAAGAAAGCCTACGGAAATTAGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGTGACCAAATATTTGAAGGCTTTGAGTCGCTTAGAGATCAATCATTTGCAGAGGTTACAAGTAGTAGTGTTTCTGTGCTATTCAGTTTTGGGGAGGCGATTGCAAATAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATTATGCGAGAGCTTCACTCTGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAGTGAGATCAAGGAATCTGCATCGAGTCTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTGGTGATTTTGAGGTAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATCAATTACGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGATAGTGGTCAAACGAATTCGGAATTGGCCAGTGTCACAATGCAAATAATGCAGGCTCTTCAGTCTAATTTGGATGGAAAATCCAAGCATTACAGAGATCCTGCTTTGACTCACTTATTCCTCATGAACAACATACACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTGGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGCGTACCAGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAAGGCACTTATTAAAGACAGGTTCAAGACTTTCAATATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCTGATACTGAGTTGCGGGAGTCTCTAAGACTTTCGGTTGCTGAAGTCTTACTTCCTGCGTACAGATCCTTCCTGAAACGTTTTGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTACGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTGGGAGAATTTTTTGAAGGGAAGAATGTGAATGAACCTAAACGGTAA 1956 42.23 MGVPATATAALGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILTQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHDSGGKNHHSAHHDNSLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIANSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACSEIKESASSLTKRLAQTAKDTFGDFEVAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNVNEPKR* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16950412 16957250 + Chy10G184250.1 Chy10g01231 235606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01231 651 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy10g01231 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 40 647 - -
Chy10g01231 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 40 647 IPR004140 GO:0000145|GO:0006887
Chy10g01231 651 Coils Coil 134 154 - -
Chy10g01231 651 Gene3D Exocyst complex component Exo70 80 651 - -
Chy10g01231 651 SUPERFAMILY Cullin repeat-like 82 642 IPR016159 -
Chy10g01231 651 MobiDBLite consensus disorder prediction 172 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00976 Chy-Chr8:17024699 Chy10g01231 Chy-Chr10:16950412 0 dispersed
Chy10g01231 Chy-Chr10:16950412 Chy12g01170 Chy-Chr12:16583153 1.74E-113 dispersed
Chy10g01231 Chy-Chr10:16950412 Chy10g01232 Chy-Chr10:16959372 2.19E-51 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01231 K07195 - csv:101206262 1247.65