Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01269 ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAGGGCAACGCTTCTAATGGTGGCAATGTTCAGAGATCCAAGAGCTTTGCCTTTCGAGCTCCTCAGGAGAATTTTACAATCCAGGATTTTGAATTGGGAAAAATTTATGGGGTTGGTTCATATTCCAAGGTCGTGAGGGCGAAGAAGAAGGACACAGGAATTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAATTGGACCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATACTTTCTCTTTGTACATGGCATTGGAGTCTTGTGAAGGTGGAGAACTTTTTGATCAGATAACTAGGAAAGGTTGTCTGTCGGAGGATGAAGCTCGGTTTTATACTGCAGAAGTGGTGGATGCCCTTGAATACATACACAGCATGGGATTGATACACCGTGATATCAAGCCTGAAAACTTGCTACTTACTACTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTGGATAGTCGAATTACGGTTCTCCCGAATGCAGCATCAGATGATAAAGCTTGTACATTTGTGGGAACGGCTGCATATGTTCCTCCAGAAGTCCTTAATTCCTCCCCAGCAACTTTCGGAAATGACCTTTGGGCACTCGGGTGCACCTTGTATCAGATGCTTTCTGGTACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTTCAGAAAATCGTAGCACGAGATATAAAATTCCCCAGCTATTTTTCCGAGAAAGCAAGGGACCTCATCGATCACCTATTGGATTTAGATCCCAGCAAGAGACCGGGTGCCGGAGCTGAGGGTTATGCTTCTCTCAAGAGTCATCCCTTCTTTGAGGGGGTTGATTGGAACAAAATAAGATCACAAACTCCTCCCAGGCTTGCTTTAGAGCCAGGGAGTCATTCAAATGAGAACGACGATAGCTCCGAGTCTTCTTGGAATCCTTCACATATTGGAGACGGCACATCGAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCCGAAGGATCACATCATATTACTCGACTTGCATCGATCGACTCCTTTGATTCAAAATGGCAACAATTCCTCGAACCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAACTTCAGAAACTAACAAGTAAAAAGGTTCAACTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAATATTATCTGGTCTGACAATCCTGTTGACCTCAGCGTTCAAGTGACCAGTCCTTCACATTTCAAGATTTGCACACCAAAGAAGATTGCCTCGTTTGAGGATGCGAAACAGCGAGCGTGGCAGTGGAAGAAGGCGATCGAGGTGCTTCAAAACCGATGA 1470 42.72 MLAMEKDFDAKLMIQGNASNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGCLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTTDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEKARDLIDHLLDLDPSKRPGAGAEGYASLKSHPFFEGVDWNKIRSQTPPRLALEPGSHSNENDDSSESSWNPSHIGDGTSRQNDGNAGSASTSEGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPVDLSVQVTSPSHFKICTPKKIASFEDAKQRAWQWKKAIEVLQNR* 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17226124 17230694 - Chy10G184630.1 Chy10g01269 235644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01269 489 MobiDBLite consensus disorder prediction 324 373 - -
Chy10g01269 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Chy10g01269 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 485 - -
Chy10g01269 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Chy10g01269 489 MobiDBLite consensus disorder prediction 334 373 - -
Chy10g01269 489 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01269 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Chy10g01269 489 Pfam PH domain 386 488 IPR033931 -
Chy10g01269 489 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01269 489 SUPERFAMILY PH domain-like 305 488 - -
Chy10g01269 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g01269 489 Gene3D - 356 489 IPR011993 -
Chy10g01269 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 485 - -
Chy10g01269 489 Coils Coil 469 489 - -
Chy10g01269 489 SUPERFAMILY Protein kinase-like (PK-like) 41 372 IPR011009 -
Chy10g01269 489 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01269 Chy-Chr10:17226124 Chy09g00965 Chy-Chr9:12338370 3.76E-56 dispersed
Chy10g01269 Chy-Chr10:17226124 Chy01g00553 Chy-Chr1:3963768 5.27E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71523 PF00069 Pkinase 2.80E-66 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01269 K06276 - csv:101212874 964.14