Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01286 ATGGAGGGATTCAACATGAAATCCTTTACATTAAAACTAATCAAGGGTTCATGGTTCATGATGTTTGCATCGTTTCTAATCATGTCGATGGCGGGCATCCCGTACATGTTCGGTTTATACTCGAGCACCATAAAGACCGTATTAGGGTACGACCAAACAACTCTAAACTTCATAAGTTTCTTTAAAGACGTCGGTACGACGGTCGGTGTCGTAGCTGGGTTAATCAACGAAGTAACCCCACCATGGTCGATTCTAGCCATCGGAGCTGTCCTCAATTTCTTCGGCTACTTCATGATTTGGCTATCCGTCTCGAAGAAAATCTCAACCCACGTTTGGTTAATGTGTCTCTACATCTGCGTGGGGGCGAACGCAACAACGTTCGCCAACACGGGGGCGTTGGTGACATGCGTAAAGAATTACCCACAACGTCGGGGAGTGGTGATCGGTATATTGAAAGGGTACATGGGGTTGAGTGGGGCGATTGTGACGCAGTTGTATCATGCGATATATGGGAAAGACGAGAAGTCGTTGATACTGTTGTTGGGGTGGTTGCCAGCAGCAGTATCGTTGGTGTTTCTGCCGACGGTGCGGCGAATGAAGGTGGAGCATGAGGAGGATGAGTTGAAGGTTTTTTATAGGTTTTTGTATATATCATTGGGATTGGCTGGGTTTTTGATGATTATGATAATTTTGCAACAGAAGTTTAGTTTTGACAGAGGGGAATTTGGAGGAAGTGCTGCGGTTGTTACCTTTTTATTGCTTTTGCCTATAGCGGTTGTTGTTGCTCAAGAGTTTAAGTCATGGCGTCGTTTGAATAAGCCAGCGGCTCTTGAAAATGGCATCTCCCCTTCTCCGGGTTCACCACCATTAAAGAACACAACACCAATGTCACTTATTCCAAAGAAACCAAAATCTCAACAACAAGAACCCATCAAAACGGAGTGGTGGAAAAATGTGTTCAATCCCCCACCAAGAGGAGACGATTGGACAATCCTTCAAGCTTTGTTCAGCTTTGACATGTTCCTGCTCTTCCTCGCCACCGCCTGCGGCGTCGGCGGCACACTTACTGCCATAGACAATCTCGGTCAAATCGGTCAATCCCAAGATTACCCCAAAAAAAGCATCAGCACATTCGTTTCCCTCGTCAGTATCTGGAATTACCTCGGCCGAGTCATGGCCGGATTCCTCTCGGAACATTTACTCATCAAATACAAATTCCCTCGTCCTTTAATGCTCACAATCGTTCTTCTTCTTTCCTGCATTGCCCATCTTTTAATCGCCTTCAATCCCTCAGGCGGTCTTTATATCGCCTCTATTTTGACCGGATACTGTTACGGTGCTCAATGGCCTCTGCTTTTCGCCATTGTTTCGGAGATTTTCGGTTTGAAATATTACGCCACTCTGTATAATTTCGGATCGGTGGCCAGCCCAGTTGGACTTTACGTGTTGAATGTGAATGTGGCTGGATATTTATACGATAAGGAAGCGAAGAAGCAGTTGGAAACGGCGGGGAAGATTAGAAAAACAGGGGAGGAGTTGGTTTGTAATGGGACGGTATGTTTTAAGCTTTCGTTTGTGATAATTACGGCGGTGAGTTTGTTTGGAGCTTTGGTTTCTTTGGTTTTGGTGTTGAGGACTAAGAAGTTTTATAAGAGTGATATTTACAAAAAGTTTAAAGAAGCAGAGGAGGCGGCGGCGGAAGAGGAAGAGGAGGAGAACGACGACGGCCGTGTGGTTAGAAATGGTGGCGGTGGTTTGATGGAGGAGACGAAACATGGTCTTAAGCAATGA 1791 45.62 MEGFNMKSFTLKLIKGSWFMMFASFLIMSMAGIPYMFGLYSSTIKTVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAIGAVLNFFGYFMIWLSVSKKISTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAAVSLVFLPTVRRMKVEHEEDELKVFYRFLYISLGLAGFLMIMIILQQKFSFDRGEFGGSAAVVTFLLLLPIAVVVAQEFKSWRRLNKPAALENGISPSPGSPPLKNTTPMSLIPKKPKSQQQEPIKTEWWKNVFNPPPRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGQSQDYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCIAHLLIAFNPSGGLYIASILTGYCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLETAGKIRKTGEELVCNGTVCFKLSFVIITAVSLFGALVSLVLVLRTKKFYKSDIYKKFKEAEEAAAEEEEEENDDGRVVRNGGGGLMEETKHGLKQ* 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17384287 17386186 - Chy10G184800.1 Chy10g01286 235661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01286 596 Gene3D MFS general substrate transporter like domains 296 578 IPR036259 -
Chy10g01286 596 SUPERFAMILY MFS general substrate transporter 12 203 IPR036259 -
Chy10g01286 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 573 - -
Chy10g01286 596 Pfam Nodulin-like 18 261 IPR010658 -
Chy10g01286 596 SUPERFAMILY MFS general substrate transporter 248 551 IPR036259 -
Chy10g01286 596 CDD MFS_Mch1p_like 18 536 - -
Chy10g01286 596 PANTHER MFS TRANSPORTER 5 573 - -
Chy10g01286 596 Pfam Major Facilitator Superfamily 340 547 IPR011701 GO:0022857|GO:0055085
Chy10g01286 596 MobiDBLite consensus disorder prediction 564 596 - -
Chy10g01286 596 Coils Coil 551 571 - -
Chy10g01286 596 MobiDBLite consensus disorder prediction 285 303 - -
Chy10g01286 596 MobiDBLite consensus disorder prediction 279 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00875 Chy-Chr8:16171905 Chy10g01286 Chy-Chr10:17384287 1.22E-73 dispersed
Chy10g01286 Chy-Chr10:17384287 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy10g01286 Chy-Chr10:17384287 Chy10g01287 Chy-Chr10:17389128 1.09E-79 tandem
Chy08g00356 Chy-Chr8:8472078 Chy10g01286 Chy-Chr10:17384287 0 transposed
Chy10g01286 Chy-Chr10:17384287 Chy03g00916 Chy-Chr3:12652224 0 wgd
Chy10g01286 Chy-Chr10:17384287 Chy04g02030 Chy-Chr4:25937425 2.14E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01286 - - csv:101205503 1144.8