Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy10g01287 | ATGTCTTTGGGATACCCAAAAAAAAGCGTAACATTAGTCAGTATTTGGAATTACCTCGGTCGAGTTGTCTCTGGTTTCGTCTCTGAAATCGTTTTAATAAAATACAAATTCCCTCGTCCTTTAATACTTTCTCTGATCCTTCTTTTATCCTATTTTGGCTACTTGATGATCGCATTTGATGTCCCAAATGGAGTATATGTTGCTTCCATCGTAATCGGATTCTGTTTAGGAGCACAATGCCCAGTAATTTTCGCTATAATTTCAGAGATTTTTGGGTTGAAATATTACTCAACGCTTTACAATTTCGTGACAGTTGCGATGCCAATTGGACTTTATATTCTGAATGTGAAAGTGGTTCAGAAGTTGTACGATAGAGAAGCAGAGAAACATCTCAAAGCAAAAGGGATTATACGAAAAGCAGGGGAAGAACTCAAGTGCTTTGGAGGGGAATGCTTTAAGCTTTGGTTCATTATAATCACTGTGGTTACTTTGTCGAGTATGTTTATTTCATTGATATTAGTGATGAGAACGAGGAGTTTCTACAAGAGTGATATTTACAAGAAGTTTAGAAATGAAGCTGAAACAGAAGTCGTCAGAAATGTGGCTGTGGAGGCCGCCGGAGCACCGGAGGAAACGAGAAAATGA | 645 | 38.29 | MSLGYPKKSVTLVSIWNYLGRVVSGFVSEIVLIKYKFPRPLILSLILLLSYFGYLMIAFDVPNGVYVASIVIGFCLGAQCPVIFAIISEIFGLKYYSTLYNFVTVAMPIGLYILNVKVVQKLYDREAEKHLKAKGIIRKAGEELKCFGGECFKLWFIIITVVTLSSMFISLILVMRTRSFYKSDIYKKFRNEAETEVVRNVAVEAAGAPEETRK* | 215 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 17389128 | 17389772 | - | Chy10G184810.1 | Chy10g01287 | 235662 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy10g01287 | 214 | SUPERFAMILY | MFS general substrate transporter | 3 | 179 | IPR036259 | - | |
| Chy10g01287 | 214 | Gene3D | MFS general substrate transporter like domains | 1 | 180 | IPR036259 | - | |
| Chy10g01287 | 214 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 2 | 205 | - | - | |
| Chy10g01287 | 214 | PANTHER | MFS TRANSPORTER | 2 | 205 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy10g01287 | Chy-Chr10:17389128 | Chy10g01289 | Chy-Chr10:17397249 | 5.43E-113 | dispersed | |
| Chy10g01286 | Chy-Chr10:17384287 | Chy10g01287 | Chy-Chr10:17389128 | 1.09E-79 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy10g01287 | - | - | csv:101205265 | 334.339 |