Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01289 ATGGTGGTCAGCGAAGGAACATTGAGATGTTTCGACATAAAAAGCATAGTCATCTACGTCATCATCGGGCGGTGGTTCGTGGTGTTTGCTTCACTCCTAATCATGGTGGTGTCAGGAACAACGTTCATGTTTGGTTTGTATTCAAGCGACATTAAATCGGCTTTGGGTTACAACCAAACGACATTGAATTTGTTGAGTTTTTTTAAGGATTTGGGTGCAAACTTCGGCGTTTTATCTGGTCTTATTAACGAGGTTACACCTCCGTGGGTGGTTCTATTAATTGGTGCGATTATGAATTTTCTTGGTTACTTTATGATTTGGCTCAGTGTTACTCGTCAAATCTCAGCCCCAAAAGTTTGGCAAATGTGTTTTTATATTTGTATGGGAGGAAATTCTCAATCCTTTGCTAATACCGGTTCTATGGTTACTTGTGTGAATAACTTTCCCGAAAGGCGTGGCGTTGTTCTCGGTCTTTTAAAGGGATACATCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCACGCATTTTACGGCGGCGACACCAAATCCTTCATTCTTTTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAGTTCGTATCATGAAAGTCATCCGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGCACAAAGCAAAACAGAGTTCACTCAGAACCAATATGGTGGCAGCGCTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTTGCCATCGTCATTATCGAAGAATACAATCTCTGGAAACTTAAAACCAAATCTGATCCAAATCCATCTGTTCAAATCATAACAGAGCAACTCCCAAAAACAGAGCATCCAAAACAAGAACAAAAAAAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGAGGCGAGGATTTCACGATTCTCCAAGCTGTCTTCAGTGTCGACATGCTGATTTTATTCCTATCTGTAACTTGTGGCGCTGGTGGAACGTTAACGGCGGTCGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAGAAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTCGGTCGAGTTGTCTCTGGGTTCGTCTCTGAAATCGTTTTGATAAAATACAAATTCCCTCGTCCTTTAATGCTTTCTCTGAACCTTCTTTTATCCTGTGTCGGCTACTTGATGATCGCATTTGACGTCCCAAATGGATTATATGTAGCTTCCATCGTAATCGGATTCTGTGTTGGAGCACAGTGGCCGTTGATTTACGCCATAATTTCAGAGATTTTTGGGTTGAAATATTACTCAACGCTTTACAATTTCGGGACAGTTGCGATGCCAGTTGGACTTTATATTATGAATGTGAAAGTGGCTGGGAAGTTGTACGACAGAGAAGCAGAGAAACAGCTCAAAGTAAAAGGGATTATACGAAAAGCAGGGGAAGAATTAAAGTGCTATGGAGAGGAATGCTTTAAGCTTTCGTTCATCGTAATCACTGCTGTTACTTTTCTGGGTATGTTTATTTCATTGATTTTAGTGATTAGAACAAGAAGTTTCTACAAAAGTGATATTTATAAAAAGTTTAGAGATGAAGCCGAAACAGAGGTGGCCGGAAATGAGGCTGTGGCGTCGGTGGGAGCAGCAGAAGAGACAGGGAAAATTATAATGCAACGAAGAAGTTGA 1758 41.7 MVVSEGTLRCFDIKSIVIYVIIGRWFVVFASLLIMVVSGTTFMFGLYSSDIKSALGYNQTTLNLLSFFKDLGANFGVLSGLINEVTPPWVVLLIGAIMNFLGYFMIWLSVTRQISAPKVWQMCFYICMGGNSQSFANTGSMVTCVNNFPERRGVVLGLLKGYIGLSGAIITQLFHAFYGGDTKSFILFIGWLPAAISFAFLRTVRIMKVIRQPNELKVFYNFLYISLVLAGFLMLMIIAQSKTEFTQNQYGGSAAAIVVLLLLPLAIVIIEEYNLWKLKTKSDPNPSVQIITEQLPKTEHPKQEQKKPSCWTTIFNPPQRGEDFTILQAVFSVDMLILFLSVTCGAGGTLTAVDNLGQIGMSLGYPKRSISTFVSLVSIWNYLGRVVSGFVSEIVLIKYKFPRPLMLSLNLLLSCVGYLMIAFDVPNGLYVASIVIGFCVGAQWPLIYAIISEIFGLKYYSTLYNFGTVAMPVGLYIMNVKVAGKLYDREAEKQLKVKGIIRKAGEELKCYGEECFKLSFIVITAVTFLGMFISLILVIRTRSFYKSDIYKKFRDEAETEVAGNEAVASVGAAEETGKIIMQRRS* 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17397249 17399260 - Chy10G184830.1 Chy10g01289 235664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01289 585 SUPERFAMILY MFS general substrate transporter 24 543 IPR036259 -
Chy10g01289 585 PANTHER MFS TRANSPORTER 10 570 - -
Chy10g01289 585 Gene3D MFS general substrate transporter like domains 310 546 IPR036259 -
Chy10g01289 585 Pfam Nodulin-like 24 269 IPR010658 -
Chy10g01289 585 CDD MFS_Mch1p_like 23 531 - -
Chy10g01289 585 Pfam Major Facilitator Superfamily 358 541 IPR011701 GO:0022857|GO:0055085
Chy10g01289 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02035 Chy-Chr4:25964268 Chy10g01289 Chy-Chr10:17397249 0 dispersed
Chy08g00356 Chy-Chr8:8472078 Chy10g01289 Chy-Chr10:17397249 0 dispersed
Chy10g01287 Chy-Chr10:17389128 Chy10g01289 Chy-Chr10:17397249 5.43E-113 dispersed
Chy10g01289 Chy-Chr10:17397249 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy10g01291 Chy-Chr10:17401786 Chy10g01289 Chy-Chr10:17397249 1.47E-121 dispersed
Chy10g01288 Chy-Chr10:17389844 Chy10g01289 Chy-Chr10:17397249 1.39E-98 tandem
Chy10g01289 Chy-Chr10:17397249 Chy10g01290 Chy-Chr10:17400923 1.35E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01289 - - csv:101205265 1033.48