Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01290 ATGTCTTTGGGATACCCAAAGAAAAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTCGGTCGAGTTGTCTCTGGGTTCGTCTCTGAAATCATTTTGATAAAATACAAATTCCCTCGTCCTTTAATACTCTCTCTTACCCTTCTTTTATCTTGTATCGGCCACTTGATGATCGCATTTGACGTCCCAAATGGATTATATGTTGCTTCCATTGTAATCGGATTCTGTTTAGGAGCACAATGGCCGATGATTTACGCCATAATTTCAGAGATTTTTGGGTTGAAGTATTACTCAACGCTTTACAATTTCGGGGCAGCTGCGATCCCAATTGGACTTTATATTATGAATGTGAAAGTGACTGGGAAGTTGTACGACAGAGAAGCAGAGAAACAGGTCAAAGCAAAAGGGATTATACGAAAAGCAGGGGAAGAATTAAAGTGCTTTGGAAGGGAATGCTTTAAGCTTTCGTTCATCATAATCACTGCAGTTACTTTGGTGGGTATGTTTATTTCATTGATTTTAGTGATTAGAACAAGAAGTTTCTACAAAAGTGATATTTATAAAAAGTTTAGAGATGAAGCCGAGACAGAGGTGGCCGGAAATGAGGCTGCGGCGACGGCGGGAGCAGCAGAAGAGACAGAGAAAGTTATAATACAAAGAAGAAGTTGA 678 39.23 MSLGYPKKSISTFVSLVSIWNYLGRVVSGFVSEIILIKYKFPRPLILSLTLLLSCIGHLMIAFDVPNGLYVASIVIGFCLGAQWPMIYAIISEIFGLKYYSTLYNFGAAAIPIGLYIMNVKVTGKLYDREAEKQVKAKGIIRKAGEELKCFGRECFKLSFIIITAVTLVGMFISLILVIRTRSFYKSDIYKKFRDEAETEVAGNEAAATAGAAEETEKVIIQRRS* 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17400923 17401600 - Chy10G184840.1 Chy10g01290 235665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01290 225 PANTHER MFS TRANSPORTER 2 216 - -
Chy10g01290 225 Pfam Major Facilitator Superfamily 3 181 IPR011701 GO:0022857|GO:0055085
Chy10g01290 225 SUPERFAMILY MFS general substrate transporter 3 183 IPR036259 -
Chy10g01290 225 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 216 - -
Chy10g01290 225 Gene3D MFS general substrate transporter like domains 1 186 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g01290 Chy-Chr10:17400923 Chy10g01292 Chy-Chr10:17404642 2.18E-127 dispersed
Chy10g01289 Chy-Chr10:17397249 Chy10g01290 Chy-Chr10:17400923 1.35E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01290 - - csv:101205029 389.808