Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy10g01291 | ATGGCAGTGTCTGGATCAACGTTCATGTTTGGTTTGTATTCGGGCGACATTAAATCGGTTTTGGGATACAATCAAACGACGTTGAATTTGTTGAGTTTCTTAAGGATTTGGGTGCAAACGTCGGCATTTTATCTGGTCTTATTAACGAGTGTTACTCATCGAATCTCTGCCCCAAAAGTTTGGCAAATGTGTCTCTATATTTGTATGGGAGGAAGTTCTCAGAACTTTGCTAATACGGGTGCTTTGGTTACTTGTGTTAATAACTTTCCCGAGAGGCGTGGCATTGTTCTCGGTATTTTAAAAGGATACGTCGGTCTAAGCGGCGCCATAATCACACAGCTCTTCCACGCATTCTACGGCGGCGACACCAAATCCTTCATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTTTTACGAACAGTTCGTATCATGAAAGTCATCCGACAGCCAAATGAGTTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTCTCCTCGCCGGATTCCTCATGCTAATGATCATTATACAAAGCAAGACAGAGTTCACTCAAAACCAATATGGTGGCAGCGCGGCTGCCATAGTCGTCCTTCTCCTCCTACCACTCGCCGTCGTCACTATTGAAGAATACACCTAA | 648 | 43.98 | MAVSGSTFMFGLYSGDIKSVLGYNQTTLNLLSFLRIWVQTSAFYLVLLTSVTHRISAPKVWQMCLYICMGGSSQNFANTGALVTCVNNFPERRGIVLGILKGYVGLSGAIITQLFHAFYGGDTKSFILLIGWLPAAISFAFLRTVRIMKVIRQPNEFKVFYNFLYISLLLAGFLMLMIIIQSKTEFTQNQYGGSAAAIVVLLLLPLAVVTIEEYT* | 216 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 17401786 | 17402738 | - | Chy10G184850.1 | Chy10g01291 | 235666 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy10g01291 | 215 | Pfam | Nodulin-like | 44 | 209 | IPR010658 | - | |
| Chy10g01291 | 215 | Pfam | Nodulin-like | 1 | 34 | IPR010658 | - | |
| Chy10g01291 | 215 | PANTHER | MFS TRANSPORTER | 44 | 214 | - | - | |
| Chy10g01291 | 215 | SUPERFAMILY | MFS general substrate transporter | 5 | 208 | IPR036259 | - | |
| Chy10g01291 | 215 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 44 | 214 | - | - | |
| Chy10g01291 | 215 | PANTHER | MFS TRANSPORTER | 1 | 35 | - | - | |
| Chy10g01291 | 215 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 1 | 35 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy10g01291 | Chy-Chr10:17401786 | Chy10g01289 | Chy-Chr10:17397249 | 1.47E-121 | dispersed | |
| Chy10g01291 | Chy-Chr10:17401786 | Chy10g01292 | Chy-Chr10:17404642 | 2.73E-95 | tandem | |
| Chy10g01291 | Chy-Chr10:17401786 | Chy04g02031 | Chy-Chr4:25942415 | 1.93E-62 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy10g01291 | - | - | csv:101205029 | 357.066 |