Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01293 ATGGTGGCCGGCCGGAGAATCTCCAATTGCTCCGACATAAGTACCATCGCGGTCCACGTCATCACCGGACGGTGGTTTGTCGTATTTGCTTCACTCTTAATTATGGCTGCGGCCGGAGCGACGTACATGTTTGGCTTGTACTCGAGCGACATAAAATCGGTTTTGGGTTACGACCAAACGACGTTGAATTTGTTGAGTTTTTTCAAGGACTTGGGTGCAAACGTCGGCATTTTGTCTGGACTTATTAACGAGGTTACGCCGCCGTGGGTGGTTCTGTCTATCGGCGCCGTATTGAACTTCTTTGGTTACTTTATGATTTGGCTTGCCGTTACTCGTCGGATCTCCGCTCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAATCCTTTGCTAATACGGGTTCTCTAGTCACTTGTGTTAAGAACTTCCCTGAAAGCCGTGGAGTCGTTCTTGGTATCTTGAAGGGATACGTCGGGCTGAGCGGTGCCATTATCACACAACTCTTCCACGCATTCTACGGCGACGATACCAAATCCTTAATTCTCCTCATCGGATGGCTACCGGCGGCAATTTCCTTCGCATCTTTACGCACAATTCGTATCATGAAAGTCATCCGCCAACCAAACGAGCTCAAAGTCTTCTACAACTTCCTCTACATTTCTCTTGCCCTCGCCGGATTTCTAATGTTAATGATCATTGTAGAAAGCAAAAAACAGTTCAATCAAAACGAATACGGTGGCAGCGCCGCCGTCGTCCTCCTTCTCCTCATCCTCCCACTTGCTGTAGTCATCATCGAAGAGTACAATCTCTGGAAACTCAAAACCGCTGTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACAGAGCATCCAAAACAAGAGCAAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGTGGCGATGATTTCACAATTCTTCAAGCTCTCTTCAGCGTCGACATGCTGATTCTATTCATCGCTGCAATCTGCGGTGTCGGTGGAACGTTAACAGCGATTGACAATTTGGGTCAAATCGGATTGTCTTTGGGATACCCAAAAAGAAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCTGAAATTGTTTTGACAAAATACAAATTCCCTCGCCCTTTAATACTCTCTCTAACCCTTCTTCTGTCCTGTGTCGGCCATTTGATGATCGCATTTGACGTCCAAAATGGGTTATATGTAGCTTCCATCGTAATCGGATTCTGCTTTGGTGCACAATGGCCGTTGATTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCAACGCTCTACAATTTCGGGTCGGTCGCGAGTCCAATTGGGCTATATGTTCTGAATGTGAAAGTGGCTGGGAATTTCTATGACAGAGAAGCAGAGAAGCAGCTCAGAGCAAAAGGGATTATACGAAAAGCAGGGGAAGAATTAAAGTGCATTGGAGGGGAATGCTTTAAGCTTTCATTCATCGTAATCACAGGAGTTACTTTATTGGGTATGTTAGTTTCATTGATTTTAGTGATTCGAACACGGAGTTTCTACCGGAGTGATATTTATAAGAAGTTCAGAGATGAAGTTGAAACAGCAGAGGTGGCCGGAAATGGGGTTGTAGAGGCCGCCGGTGTACCAGAAGAGAGAAGAAAATGA 1746 44.67 MVAGRRISNCSDISTIAVHVITGRWFVVFASLLIMAAAGATYMFGLYSSDIKSVLGYDQTTLNLLSFFKDLGANVGILSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTRRISAPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGDDTKSLILLIGWLPAAISFASLRTIRIMKVIRQPNELKVFYNFLYISLALAGFLMLMIIVESKKQFNQNEYGGSAAVVLLLLILPLAVVIIEEYNLWKLKTAVIKSPNPSVQIVTEKLPKTEHPKQEQKEPSCWTTIFNPPQRGDDFTILQALFSVDMLILFIAAICGVGGTLTAIDNLGQIGLSLGYPKRSISTFVSLVSIWNYLGRVASGFISEIVLTKYKFPRPLILSLTLLLSCVGHLMIAFDVQNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLRAKGIIRKAGEELKCIGGECFKLSFIVITGVTLLGMLVSLILVIRTRSFYRSDIYKKFRDEVETAEVAGNGVVEAAGVPEERRK* 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17408068 17410073 - Chy10G184870.1 Chy10g01293 235668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01293 581 Pfam Nodulin-like 24 269 IPR010658 -
Chy10g01293 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 564 - -
Chy10g01293 581 Gene3D MFS general substrate transporter like domains 331 547 IPR036259 -
Chy10g01293 581 CDD MFS_Mch1p_like 23 533 - -
Chy10g01293 581 PANTHER MFS TRANSPORTER 9 564 - -
Chy10g01293 581 SUPERFAMILY MFS general substrate transporter 23 545 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00916 Chy-Chr3:12652224 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy04g02032 Chy-Chr4:25945943 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy08g00876 Chy-Chr8:16172607 Chy10g01293 Chy-Chr10:17408068 1.03E-69 dispersed
Chy10g01286 Chy-Chr10:17384287 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy10g01288 Chy-Chr10:17389844 Chy10g01293 Chy-Chr10:17408068 3.05E-76 dispersed
Chy10g01289 Chy-Chr10:17397249 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy10g01293 Chy-Chr10:17408068 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy10g01292 Chy-Chr10:17404642 Chy10g01293 Chy-Chr10:17408068 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01293 - - csv:101204293 1060.06