Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g01323 | ATGGCCAAAGACGACGTTACGGCGGCAAGAGGGTTCTCCGGCAAGGACTACCACGACCCTCCTCCGGCCCCGCTCTTCGACGCGGAGGAGCTCTGCAAGTGGTCCTTTTACAGAGCCATCATTGCTGAGTTCATTGCCACTCTTCTTTTTCTCTATGTAGTGATCTTGACTATCATCGGCTACAACAGCCAGACCGATACCGACAAGCCCGGCACCAACGCTTGCGATGGCGTTGGCATTCTCGGCATCGCTTGGTCCTTTGGCGGCATGATCTTCGTCCTTGTCTACTGCACTGCTGGCATTTCAGGAGGGCACATAAACCCGGCGGTGACGTTCGGGCTGTTCTTGGCTCGTAGAGTGTCATTGGTGCGAGCAGTAGCGTACATGGTGGCTCAGTGTTTAGGGGCCGTGTGCGGTGCGGGGCTAGTAAAAGCCTTCCAAAAAGGTTACTACAACAAGTACGGTGGCGGTGCGAACCAACTCGCCCATGGCTACTCCAAAGGCACCGGCTTGGGAGCTGAAATCGTTGGTACCTTTATCTTGGTTTACACCGTTTTCTCCGCCACCGATTCCAAGAGAAATGCCAGAGACTCCCATGTTCCTGTATTGGTTCCACTCCCCATTGGGTTTGCTGTGTTTATGGTTCACTTGGCCACCATCCCCATCACCGGCACAAGCATCAACCCCGCAAGAAGCTTCGGCCCTGCTGTTATCTTGAATAGGGAAAAACCTTGGGATGACCATTGGATATTCTGGGTTGGGCCATTTGTGGGGGCGGCCATCGCAGCGTTCTACCACCAGTTCATCTTGAGGGCGGGCGCGGCCAAAGCTCTGGGCTCTTTCAGGAGCAACCCCTCCGTCTGA | 864 | 55.09 | MAKDDVTAARGFSGKDYHDPPPAPLFDAEELCKWSFYRAIIAEFIATLLFLYVVILTIIGYNSQTDTDKPGTNACDGVGILGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARRVSLVRAVAYMVAQCLGAVCGAGLVKAFQKGYYNKYGGGANQLAHGYSKGTGLGAEIVGTFILVYTVFSATDSKRNARDSHVPVLVPLPIGFAVFMVHLATIPITGTSINPARSFGPAVILNREKPWDDHWIFWVGPFVGAAIAAFYHQFILRAGAAKALGSFRSNPSV* | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17592391 | 17595917 | + | Chy10G185170.1 | Chy10g01323 | 235698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | PANTHER | AQUAPORIN PIP2-4-RELATED | 10 | 284 | - | - | |
Chy10g01323 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Chy10g01323 | 287 | Gene3D | Glycerol uptake facilitator protein. | 23 | 287 | IPR023271 | - | |
Chy10g01323 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 10 | 284 | IPR034294 | - | |
Chy10g01323 | 287 | Pfam | Major intrinsic protein | 31 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | SUPERFAMILY | Aquaporin-like | 30 | 271 | IPR023271 | - | |
Chy10g01323 | 287 | CDD | MIP | 38 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy10g01323 | 287 | TIGRFAM | MIP: MIP family channel proteins | 42 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy03g00960 | Chy10g01323 | CCT | |
Chy03g00960 | Chy10g01323 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy08g00518 | Chy-Chr8:12405477 | Chy10g01323 | Chy-Chr10:17592391 | 6.13E-13 | dispersed | |
Chy01g00675 | Chy-Chr1:4879412 | Chy10g01323 | Chy-Chr10:17592391 | 7.86E-156 | transposed | |
Chy10g01323 | Chy-Chr10:17592391 | Chy11g00808 | Chy-Chr11:11587712 | 4.45E-162 | wgd | |
Chy10g01323 | Chy-Chr10:17592391 | Chy03g00960 | Chy-Chr3:13152706 | 5.04E-144 | wgd | |
Chy10g01323 | Chy-Chr10:17592391 | Chy04g02069 | Chy-Chr4:26182920 | 2.23E-151 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g01323 | K09872 | - | csv:101204956 | 563.148 |