Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01343 ATGGACCGGCAAAGATCTCCGGTATTCTGTCCGGAGAACGAAGACCTTGCCGACTTCATGTGGCAGAAGCGGCTAGAAATGGCGGCGACACCTAAAGGAATCTCTGACAAAGTCGATATGACTCTGTATAAAGCTTATTTGAATGTTTGCAACTCTAAGGTCTCCATTACGTCCATGAAGGATCTCTCTCAGATCAAAGGCGTAGGGAAGTGGATTCTTAAACAAGTACAAGGTTTTTTTAAGAGTGGTTCTGAAGGTTCTGGACCCGAGGAATTGGCGGGAAAAGGTAAGAAAATAAAGGGGACCAGGCGCTATATTCCACAGAAGAACTCGGTTGCATATGCCTTATTGATCACTCTTTATAGGGGTACAACAAATGAGAATGAATACATGCGTAAGCAGGAGCTTATTGATGCAGCTGAAGCAAGTGGTCTTTCTAGGGTGGCGATTGCGCCAGAGAAGGGTAAAGGAAAACCTAGTCAATTTGGAAGCTCTTCGAGGGATTGGTACAGTGGATGGAGCTGCATGAAGACATTGATATCAAGGGGATTGGTGGTGAAATCTAATTGCCCAGCAAAATACATGCTTACAGAGGAGGGGCAGCAAGTGGCACGTGAATGTCTTATGAGATCTGGACTGTTAAGTTCTTCAAAGAACTTTGATAACACAAAAGGATCCTCTATTCTCGAATCATGTGATATATCTAATCACAGTGCTAATTATCTTGATTCAGATGTAGAAGTGACTTCACCATCTGTTAGTCAGAGTACTAAGCACAAATCAACTGATGTGCCCCTTGAATCACTTGAGAGGTTTATGCGCATGGGTTACTCTAAGCATCAAGTTATTAATTCCTTTAAAGAAGTTTCAAAGGATAATCCAAACAAGGATATCTCATCACTTTGGCCAGCAGTTTTATGTCGTCTACGCGAAGATCTTGTTTATGGTCAAGTAGAAGCAGTTGGAAGAGAAAATAGGTCAATGGGTTCTTCTCATGAGGGGAGTGAGCCAAAGAATGTTGTTAAAGTTAATGGGGAGAGATCTTTTAGCTCGAGAGCTTGCTCATCATCTAATCCTTCCATCATTGAATCCCGTAGAGATAGTGTCAAAGGAAATACAAACATCTTGAGCATGCCACCTTTGAGCTTTGGTGAAAAATTTGAAGATTGTTATAACGTAGTCCTGATATTGGACGATCGAGAACAGTTTGCCAAGCACAGTTCTCGGTCTAGGAGAATGATTGAGAATATCTGTAGCCAATTCAAGATTCAGATTGAGATTAGGAGGCTGCCTGTTGGTGATGGAATCTGGATAGCCCGCCATAAACATCTTGATAATGAATATGTTCTTGATTTTATTGTTGAGAGGAAAGATGTTGATGATTTGCGGTGCTCAATCAGGGACAATCGCTACAGAGACCAGAAATTAAAACTTCTGAGATGTGGTCTTAAAAGAATGATATATCTTGTGGAAGGTGATCCCAATTCATCTGAAGCGGCAGAAAGCATCAAAACAGCTTGCTTTACAACAGAGATTTTAGAGGGATTTGATGTGCAAAGAACCAGTGGCTTGTCAGATACACTAAAGAAGTATGGTTATCTTACTCATGCAATTACACAATACTACATATTACAGGCATCTGATGATCGTGTTAGTCATTCTGATGTCTGTCCTCGTTTCGATCAATTTATAAAAAAATGCCAAGAATTGGATAAGAGGACGGTTAGTGATGTTTTTGCACTTCAGCTCATGCAGGTCCCACAGGTTACGGAGGAGGTTGCTGTTGCTGTTTTGGATTTGTACCCCACTCTTCTATCACTTGCCCGAGCGTACTCTCTTTTAGACGGTAATGTTACTGAACAAGAAGAGATGTTAAGGAGACAGAGCAACAATTTGATCAATGCAGGTACTTCAATGGCAGGAATGTTTAATGGGGAGGGTTCATCGTCGGTAACTTCGTCGCCTTTGCAGTTCTTTCCGTGGTCGTTATCACCCGGTATAGGATCGCCATACCCTTTTCTAAGAGAACTCAAATCTGAAGAGAGGGGCTTGTGTTTGATTCACCTACTTCTTAGCTGCGCCAACCAAGTTGCTATTGGTAACATTGAAAATGCTAATGTTGGCCTCGAGCAAATTTCCCACCTTGCTTCGCCAGACGGGGACACAATGCAGCGGATTGCTGCTTACTTCACCGAGGCACTCGCGGATCGAATACTTAAATCCTGGCCTGGCTTACACAAAGCCTTGAACTCTACCAAAATTTTGTCAGTCCCTGAAGAGATTCTTGCCCAGAGATTGTTCTTTGAATTGTGTCCTTTCTTGAAGCTTGCATATGTGATGACTAACCAGGCTATTATAGAAGCCATGGAGGGAGAAAGGATGATTCATATTATTGATTTCAAATCTTGTGAACCTGCTCAGTGGATAAACCTTCTTCAAACATTGAAAGATAGGCCAGATGGTCCACCCCACCTGAGAATAACTGGAATTCATGAACAAAAGGAAGTGTTGGAACAAATGGCTCTTCGGCTTACAGAAGAGGCCGAAAAATGGGATATACCATTTCAATTCACCCCAGTTGTCAGCAAATTAGAAAACCTTGACCTTGAAAGTTTAAGGGTTAAGACAGGTGAAGCACTTGCAGTTAGCTCTGTTCTTGAACTTCATTCGGTTTTGGCTACAGATGACGATAAGAAAACGTCGCCACCTGCATTAAAAAATTTGCAAAAATTCCTACGTAGGAAGCAGCGAACACTAGGAGAATGGCTTGAGACAGATTCGTTGCAAGTTTTTAGTAGCCCGGATTCAGCCTCAGTATCTTCCCCATCAGGATTGAATCCTTCCCAAAAGATGAACAGTTTTTTGACTGCATTATGGGGCCTTTCTCCAAAAGTTATGGTAATAACTGAGCAAGAATCAAACCTGAATGGATCTGCTTTCATGGAAAGAGTACTAGAAGCATTGAACTTCTATGCTGCATTGTTTGATTGCTTAGAGTCAACTGTGTCACGATCATCGATCGAACGACAAAGGGTCGAGAAAATGCTTTTGGGAGAGGAAATAAAAAACATCATTGCTTGTGAGGGGGCAGAGAGGACGGAAAGGCATGAAAAGCTAGAGAAATGGATGCTGAGGCTCGAATCCGTGGGGTTCGGAAAGGTTCCATTGAGTTACCATAGTATGTTATTGGGAAGTAGATTGTTGCAGAGCTATGGATATGATGGACTTGAGCTTATAGGCCCGATGGAGGGTACCATTGCTGAAGAACTTTATTCCGAGAGTTTGCAGTTAACACAGTCAAAATTGGGTGATATTTCATTATCTGATTACAAAAAAGATCGGCCATCAGGTTCTGGTGTGGATGACTCGTGCGAAGATGATGGATCTTTATGGGGTGGCTCTGATGAAGGCTTGGAGGAAACAGCTGATTTGGACAGGGAGTGGCAGAGAAGACATGACCAATTTCATACGATTGGATACCGTGATGGTTTAGTTGCTGGGAAAGAAGCTGCAGCTCAAGAGGGATTTAATATTGGCTTCAAGCAGTCAGTCTCTGTTGGATATAAGTTGGGTCTTGTCAGAGGTGTTAGCAGTGTGCTTGCTTCCCTTCCTGCTGACTTCAAAGAGAAGCTAGCTGGAATTCCCGAGAACCAAAGTAAATTCCAAAGCTTGTATGAATCTTTGAACTCCCTTTCGACAGTAGATGCGCTTAGTCTATTCAATGGGGATATTACGACACACCGCACAAAAGAAGCGTTTGTCAGTGCAAATACAAATTCGCAAACCATGGATTTATTGAAGGAAAATCCAGATTATGGTCGTCTAGGAAAGTTCTATGAAGAGCTTGCAGCACTTTTACCACAATCGCCTGCTCTGAATGTTCATTTACATTTGCTGTAA 3900 42.23 MDRQRSPVFCPENEDLADFMWQKRLEMAATPKGISDKVDMTLYKAYLNVCNSKVSITSMKDLSQIKGVGKWILKQVQGFFKSGSEGSGPEELAGKGKKIKGTRRYIPQKNSVAYALLITLYRGTTNENEYMRKQELIDAAEASGLSRVAIAPEKGKGKPSQFGSSSRDWYSGWSCMKTLISRGLVVKSNCPAKYMLTEEGQQVARECLMRSGLLSSSKNFDNTKGSSILESCDISNHSANYLDSDVEVTSPSVSQSTKHKSTDVPLESLERFMRMGYSKHQVINSFKEVSKDNPNKDISSLWPAVLCRLREDLVYGQVEAVGRENRSMGSSHEGSEPKNVVKVNGERSFSSRACSSSNPSIIESRRDSVKGNTNILSMPPLSFGEKFEDCYNVVLILDDREQFAKHSSRSRRMIENICSQFKIQIEIRRLPVGDGIWIARHKHLDNEYVLDFIVERKDVDDLRCSIRDNRYRDQKLKLLRCGLKRMIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLSDTLKKYGYLTHAITQYYILQASDDRVSHSDVCPRFDQFIKKCQELDKRTVSDVFALQLMQVPQVTEEVAVAVLDLYPTLLSLARAYSLLDGNVTEQEEMLRRQSNNLINAGTSMAGMFNGEGSSSVTSSPLQFFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLSCANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVMTNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSVLATDDDKKTSPPALKNLQKFLRRKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLTALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWMLRLESVGFGKVPLSYHSMLLGSRLLQSYGYDGLELIGPMEGTIAEELYSESLQLTQSKLGDISLSDYKKDRPSGSGVDDSCEDDGSLWGGSDEGLEETADLDREWQRRHDQFHTIGYRDGLVAGKEAAAQEGFNIGFKQSVSVGYKLGLVRGVSSVLASLPADFKEKLAGIPENQSKFQSLYESLNSLSTVDALSLFNGDITTHRTKEAFVSANTNSQTMDLLKENPDYGRLGKFYEELAALLPQSPALNVHLHLL* 1300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17711281 17729927 + Chy10G185370.1 Chy10g01343 235718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01343 1299 Pfam Essential protein Yae1, N terminal 1159 1196 IPR019191 -
Chy10g01343 1299 SMART ERCC4_2 394 494 IPR006166 GO:0003677|GO:0004518
Chy10g01343 1299 Gene3D - 97 219 IPR036388 -
Chy10g01343 1299 Gene3D - 573 640 IPR042530 -
Chy10g01343 1299 MobiDBLite consensus disorder prediction 1111 1137 - -
Chy10g01343 1299 Pfam GRAS domain family 686 1077 IPR005202 -
Chy10g01343 1299 Gene3D - 388 536 - -
Chy10g01343 1299 ProSiteProfiles GRAS family profile. 677 1111 IPR005202 -
Chy10g01343 1299 PANTHER CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 10 638 IPR033309 GO:0000737|GO:0006302|GO:0008821
Chy10g01343 1299 SUPERFAMILY Restriction endonuclease-like 391 536 IPR011335 -
Chy10g01343 1299 Pfam ERCC4 domain 398 528 IPR006166 GO:0003677|GO:0004518
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01488 Chy-Chr2:12245861 Chy10g01343 Chy-Chr10:17711281 0 dispersed
Chy10g01343 Chy-Chr10:17711281 Chy03g00094 Chy-Chr3:912130 2.50E-63 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18643 PF03514 GRAS 4.20E-121 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01343 K08991 - csv:101219408 1181.01