Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01363 ATGTCCCTTCTCTCTTCTGATCAGCCTCGCTTTCATGTTTTGGCTGTTGATGACAGCCTTGTTGACAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTCACTGCTGTGGATTCTGGAAGCAAAGCTTTAGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAACCAGCCATAATTCTCCTATTTCCCCTGCAGATCATCGTCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAGATGACAGGCTATGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTTAAACCAGTGAAATTATCTGATGTGAACAAGCTTAAGCCTTTTATATGTAGAGGAATAAAAGCCAAGGAAATGGATTTCAACCATATCAAGAGAAAGGAAATGGAAATCATCTGA 522 39.85 MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTSHNSPISPADHRQHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHIKRKEMEII* 174
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 17856425 17857751 - Chy10G185570.1 Chy10g01363 235738
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01363 173 SMART REC_2 11 148 IPR001789 GO:0000160
Chy10g01363 173 Gene3D - 12 165 - -
Chy10g01363 173 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 173 IPR045279 GO:0009736
Chy10g01363 173 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 173 - -
Chy10g01363 173 CDD REC_typeA_ARR 13 147 - -
Chy10g01363 173 ProSiteProfiles Response regulatory domain profile. 12 152 IPR001789 GO:0000160
Chy10g01363 173 SUPERFAMILY CheY-like 10 144 IPR011006 -
Chy10g01363 173 Pfam Response regulator receiver domain 13 144 IPR001789 GO:0000160
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01651 Chy-Chr4:22869234 Chy10g01363 Chy-Chr10:17856425 2.08E-07 dispersed
Chy08g00289 Chy-Chr8:6751093 Chy10g01363 Chy-Chr10:17856425 6.92E-66 dispersed
Chy10g00305 Chy-Chr10:7699677 Chy10g01363 Chy-Chr10:17856425 6.81E-39 dispersed
Chy10g00941 Chy-Chr10:14996171 Chy10g01363 Chy-Chr10:17856425 3.50E-51 dispersed
Chy10g01363 Chy-Chr10:17856425 Chy09g01472 Chy-Chr9:16142628 3.85E-14 dispersed
Chy10g01363 Chy-Chr10:17856425 Chy02g02547 Chy-Chr2:28742346 2.94E-50 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18645 PF00072 Response_reg 2.60E-20 CL0304 Chy TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01363 K14492 - csv:101207245 319.701