Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g01363 | ATGTCCCTTCTCTCTTCTGATCAGCCTCGCTTTCATGTTTTGGCTGTTGATGACAGCCTTGTTGACAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTCACTGCTGTGGATTCTGGAAGCAAAGCTTTAGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAACCAGCCATAATTCTCCTATTTCCCCTGCAGATCATCGTCAACATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAGATGACAGGCTATGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTTAAACCAGTGAAATTATCTGATGTGAACAAGCTTAAGCCTTTTATATGTAGAGGAATAAAAGCCAAGGAAATGGATTTCAACCATATCAAGAGAAAGGAAATGGAAATCATCTGA | 522 | 39.85 | MSLLSSDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGTSHNSPISPADHRQHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGIKAKEMDFNHIKRKEMEII* | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17856425 | 17857751 | - | Chy10G185570.1 | Chy10g01363 | 235738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g01363 | 173 | SMART | REC_2 | 11 | 148 | IPR001789 | GO:0000160 | |
Chy10g01363 | 173 | Gene3D | - | 12 | 165 | - | - | |
Chy10g01363 | 173 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 173 | IPR045279 | GO:0009736 | |
Chy10g01363 | 173 | PANTHER | RESPONSE REGULATOR ARR8, PUTATIVE-RELATED | 3 | 173 | - | - | |
Chy10g01363 | 173 | CDD | REC_typeA_ARR | 13 | 147 | - | - | |
Chy10g01363 | 173 | ProSiteProfiles | Response regulatory domain profile. | 12 | 152 | IPR001789 | GO:0000160 | |
Chy10g01363 | 173 | SUPERFAMILY | CheY-like | 10 | 144 | IPR011006 | - | |
Chy10g01363 | 173 | Pfam | Response regulator receiver domain | 13 | 144 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01651 | Chy-Chr4:22869234 | Chy10g01363 | Chy-Chr10:17856425 | 2.08E-07 | dispersed | |
Chy08g00289 | Chy-Chr8:6751093 | Chy10g01363 | Chy-Chr10:17856425 | 6.92E-66 | dispersed | |
Chy10g00305 | Chy-Chr10:7699677 | Chy10g01363 | Chy-Chr10:17856425 | 6.81E-39 | dispersed | |
Chy10g00941 | Chy-Chr10:14996171 | Chy10g01363 | Chy-Chr10:17856425 | 3.50E-51 | dispersed | |
Chy10g01363 | Chy-Chr10:17856425 | Chy09g01472 | Chy-Chr9:16142628 | 3.85E-14 | dispersed | |
Chy10g01363 | Chy-Chr10:17856425 | Chy02g02547 | Chy-Chr2:28742346 | 2.94E-50 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18645 | PF00072 | Response_reg | 2.60E-20 | CL0304 | Chy | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g01363 | K14492 | - | csv:101207245 | 319.701 |