Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01378 ATGGCTGATGCTGGATATTTCCTCTCTTCGAGTATTATAGAGAACCTCAAAGTATATGCCATGACCGATGTCAGTCCAAGGACTGATATCTCTACTGATGTCGACACTGATGACAAACACCAGAGGCTCGATATGCTTCAACGGAATGCTGTGGCTTCTGATTCCAGTGATCGAACGAAAGATAAGTCTGATCAGAAGACTCTACGCAGGCTTGCACAGAATCGTGAAGCTGCCAGGAAAAGCCGACTGCGAAAAAAAGCATATGTCCAACAGCTGGAGAGTAGTCGTTTAAAGTTGACCCAACTAGAGCAGGAGCTTCAGCGGGCACGGCAGCAGGGAATCTTCATATCAAGCTCAGGAGATCAGGTCCATTCAATGGCTGGAAATGGGGCCATGGCATTTGATGTGGAATATGCCCGTTGGTTGGAAGAACAAAACAAGCAAATCAATGAACTGAGAGCAGCAGTTAATTCTCATGCCAGTGATACTGAACTTCGAATGATTGTGGATGGCATCTTGGCTCATTATGATGAAGTTTTTCGGCTAAAGGGTGTCGCTGCAAAGGCTGATGTTTTTCATTTATTGTCTGGCATGTGGAAAACTCCTGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCAGAGCTTCTAAAGCTTCTTGTCAATCAATTGGAGCCCCTCACAGAACAGCAGTTGATGGACATATCCAACTTGCAGCAGTCCTCACAACAGACCGAAGATGCATTGTCACAAGGCATGGAAGCATTGCAACAATCGTTGGCTGAGACGTTATCCAGTGGATCTCTTGGCTCCTCGAATACATCTGGCAATGTGGCAAACTATATGGGTCAAATGGCCACGGCCATGGGTAAACTTGGGACCCTTGAGGGTTTTATTCGCCAGGCTGACAATCTACGACAACAAACACTACAACAAATGCATCGGATTTTGACAACTCGTCAGTCGGCTCGTGCACTTCTTGCAATTCATGATTACTTCTCCAGACTGCAAGCCCTTAGCTCCCTCTGGCTTGCTCGCCCAAAAGAGTGA 1056 46.31 MADAGYFLSSSIIENLKVYAMTDVSPRTDISTDVDTDDKHQRLDMLQRNAVASDSSDRTKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQVHSMAGNGAMAFDVEYARWLEEQNKQINELRAAVNSHASDTELRMIVDGILAHYDEVFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLMDISNLQQSSQQTEDALSQGMEALQQSLAETLSSGSLGSSNTSGNVANYMGQMATAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLQALSSLWLARPKE* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17993986 18001948 + Chy10G185720.1 Chy10g01378 235753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01378 351 SUPERFAMILY Leucine zipper domain 66 109 IPR046347 GO:0003700|GO:0006355
Chy10g01378 351 Gene3D - 65 117 - -
Chy10g01378 351 Coils Coil 142 162 - -
Chy10g01378 351 MobiDBLite consensus disorder prediction 47 68 - -
Chy10g01378 351 CDD bZIP_HBP1b-like 66 118 - -
Chy10g01378 351 Pfam Seed dormancy control 148 223 IPR025422 GO:0006351|GO:0043565
Chy10g01378 351 SMART brlzneu 62 125 IPR004827 GO:0003700|GO:0006355
Chy10g01378 351 Pfam Basic region leucine zipper 62 108 IPR004827 GO:0003700|GO:0006355
Chy10g01378 351 PANTHER TRANSCRIPTION FACTOR TGA9 10 351 - -
Chy10g01378 351 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 10 351 - -
Chy10g01378 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 108 IPR004827 GO:0003700|GO:0006355
Chy10g01378 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Chy10g01378 351 Coils Coil 85 112 - -
Chy10g01378 351 MobiDBLite consensus disorder prediction 54 68 - -
Chy10g01378 351 ProSiteProfiles DOG1 domain profile. 131 348 IPR025422 GO:0006351|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g00855 Chy10g01378 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00855 Chy-Chr3:11789748 Chy10g01378 Chy-Chr10:17993986 0 dispersed
Chy04g01664 Chy-Chr4:23054917 Chy10g01378 Chy-Chr10:17993986 0 dispersed
Chy04g01760 Chy-Chr4:23957924 Chy10g01378 Chy-Chr10:17993986 7.48E-128 dispersed
Chy07g01307 Chy-Chr7:17728285 Chy10g01378 Chy-Chr10:17993986 4.83E-103 dispersed
Chy10g01378 Chy-Chr10:17993986 Chy11g00902 Chy-Chr11:12421869 1.23E-91 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18649 PF14144 DOG1 5.50E-33 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01378 K14431 - csv:101216885 602.438