Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g01383 ATGGAAAACGTGGGCGAAACAAAGCCATTAGCTACAAATAGTTGCCATACTGATGGTGGAACAGACACTGCTGCCGACGTTCAATTTTCAGTATTATGTCAGCATGGATTACATCTGGACGAGAATTGTTGTAATCAAGCATTCAAGTTATTTAGAGAGACGAAACATCTTTTGGGGGCAAATATATCAGCAATTGGGAGTGGAATTCCTGAAGAAGCCGAACGTTTTTGGTCTGCTTTTGTTTTATATTCGGTGAAGAGGCTGAGAGATAAGAATTCAGAGAGTTCACATCAGGGATCTGAGAACAACGGCTTCACTTTATGCCACATATTGAGAGTTTGCAAGCTGAAAATTGTAGAATTTTTTAAAGAGCTGCCTCAATTTGTTGTTAAAGCTGGTCCAGTATTAAGTAATCTCTATGGTGCAGACTGGGAGAATAGACTAGAGGCAAAGGAGTTGCAGGCTAACTTCGTGCATTTGAGCCTCTTAAGCAAGTATTATAAGCGTGTCTACCGAGAGTTCTTCTCCACCAATGATGCTAATGTTGAAAAGCAGTCAGCTATATCCTGCCCTACCGGTTACTTATCTGATTACCATCGTTTTGGATGGTTGTTGTTTTTGGCACTTCGTGTACATGCTTTCAGTCGTTTTAAGGACTTGGTGACTTGCACTAATGGTTTGGTTTCCATTTTGGCTATTTTAATTCTTCATGTTCCGGTTCATTTCAGAAACTTCAACATTCTTGACACTGAACGCCTTGTTAAGAAAGGAGGAAAAGGAGTGGATCTGCTTGGATCACTTTGTGATGTCTATGACACCTCAGAGGAAGAACTGAGGGAAGTTATGGAAAAGGCTAATAGCTTGATAGAAGATATTTTGAAGAAGAAGCCTCGTTTTGCTTCTGAGTGTAACAGTAAAAGCTTGGAAAATATTGACACTGAGGGTTTGATATACTTTGAAGGCTTAATGGAGGAGCCATCTCTTTCAGCCAGTTTGGAAATTCTTGAAAAAGACTATGAAGATGCAATTCATAATAAAGGTGAGCAGCTTGATGAGCGGGTATTTATTAACGACGAGGACAGTTTACTTGGGTCAGGTAGCTTGTCAGCAGGTGCTGTTACAATGGGTGGAATCAAGAGGAAGCTTGACTCAATGTGCTCTCCTGCAAGGACAATAACCAGTCCAATGTCTCCACTTCGGTCTCCTGCTTCGCATGCCAATGGCACTCTTAATAGTGGCAACGCAAAAATTGCAGCCACACCAGTTAGCACAGCCATGACAACGGCAAAGTGGCTCAGAACTGTTATTTCCCCCCTTCCAGCAAAACCTTCAGTGGAGATGGAGCGCTTTTTGGCTTCATGTGATAGGGATGTAACTAATGATGTAGTCCGCAGGGCACACATTATACTAGAGGCTATATTTCCAAATACTGCTCTAGGTGAGCGCTGTATAGCTGGAAATTTACAAAGTGCAAGCCTCATGGATAACATCTGGGCAGAACAGCGGCGACTAGAAGCACTGAAGTTATATTATAGAGTTCTGGAAGCAATGTGCAGAGCAGAGTCACAGATGCTGCATGTGACTAATTTGACCTCATTGCTGACTAATGAGAGGTTCCACAGATGTATGCTGGCTTGTTCTGCCGAATTGGTTTTGGCAACGCATAAAACTGTTACGATGTTGTTTCCTGCAGTATTGGAGAGAACCGGCATCACAGCTTTTGACCTTAGTAAGGTGATAGAAAGTTTCATTCGACACGAAGAATCGCTTCCTAGAGAATTAAGGCGACATCTCAATTCTTTGGAAGAACGGCTATTAGAGAGCATGGTATGGGAAAAAGGTTCATCAATATATAACTCCCTGATTGTTGCTAAACCTGGCCTTGGTGTAGAAATTAATCGTCTGGGTTTATTAGCTGAACCCATGCCATCTTTGGATGCAATTGGTGTTCAAATTAACTTCTCTGGTAACGGGGTATCAGCCACACCTAATTTGCAAAAGCATGAGAGTTTGCCAGGTCAGAATGGGGATATAAGGTCACCCAAAAGATTGTGCACAGATTTAAGAAGTGTGCTAGTGGAACGGAATTCCTTTACTTCTCCAGTGAAGGACCGACTCATGGCTTTCAGTAGTATTAAATCTAAGCTTCTGCCACCTCCCTTACAGTCGGCATTTGCAAGTCCTACTCGGCCTAATCCTGGAGGTGGTGGAGAAACTTGTGCTGAAACTGGAATTAACATTTTCTTTAGTAAGATCACAAAATTGGCTGCTGTAAGAGTCAATGGTATGGTGGAAAGGTTGCAGTTGTCTCATCAGATTAGGGAGAATGTCTACTGCCTTTTCCAACAGATACTCAGTCAAAAGACGTCAATATTGTTTAATCGTCACATCGACCAGATCATCCTTTGTTGTTTCTATGGCGTTGCAAAGATATCTCAATTGAGCCTCACGTTTAGGGAAATCATATACAACTACAGGAAGCAACCACAATGTAAACCACAAGTCTTCCGCAATGTGTTTGTTGATTGGTCTTCAGCACGCCGTAATGGGAGATCAGGACAGGATCATGTGGATATAATTACCTTCTACAATGAAATATTTATCCCTTCTGTAAAACCTTTGCTCGTTGAGATTGGCCCAGCTGGATCAACCATGAAAACTGACAGGGTTCCTCAAGTCAACAACGACAGTGATGCACCGTGTCCTGGATCACCTAAGTTATCTCCTTTTCCAAGTCTTCCCGATATGTCACCAAAGAAAGTATCTTCAGCACATAATGTCTATGTCTCTCCATTAAGATCATCAAAGATGGATGCGTTGATTTCACATAGTTCAAAAAGCTACTACGCTTGCGTTGGAGAGAGCACTCATGCGTTTCAAAGCCCTTCAAAAGACCTTACTGCCATCAACAACCGTTTGAACGGTACACGAAAACTCCGAGGCACGTTAAATTTTGACGATGCGGACGTTGGTTTGGTCAGTGATTCCCTGGTGGCTAACAGCCTTTACCTACAAAATGGAAGTTGTGGATCATCTTCAGGTGCACCTATTAAATCTGAACAACCTGAGTCTTAA 3075 42.24 MENVGETKPLATNSCHTDGGTDTAADVQFSVLCQHGLHLDENCCNQAFKLFRETKHLLGANISAIGSGIPEEAERFWSAFVLYSVKRLRDKNSESSHQGSENNGFTLCHILRVCKLKIVEFFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYKRVYREFFSTNDANVEKQSAISCPTGYLSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPVHFRNFNILDTERLVKKGGKGVDLLGSLCDVYDTSEEELREVMEKANSLIEDILKKKPRFASECNSKSLENIDTEGLIYFEGLMEEPSLSASLEILEKDYEDAIHNKGEQLDERVFINDEDSLLGSGSLSAGAVTMGGIKRKLDSMCSPARTITSPMSPLRSPASHANGTLNSGNAKIAATPVSTAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDVVRRAHIILEAIFPNTALGERCIAGNLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAESQMLHVTNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSIYNSLIVAKPGLGVEINRLGLLAEPMPSLDAIGVQINFSGNGVSATPNLQKHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFVDWSSARRNGRSGQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPCPGSPKLSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQSPSKDLTAINNRLNGTRKLRGTLNFDDADVGLVSDSLVANSLYLQNGSCGSSSGAPIKSEQPES* 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18092761 18100465 - Chy10G185770.1 Chy10g01383 235758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g01383 1024 SMART DUF3452_2 88 237 IPR024599 -
Chy10g01383 1024 MobiDBLite consensus disorder prediction 886 918 - -
Chy10g01383 1024 PANTHER BNACNNG22930D PROTEIN 28 1010 - -
Chy10g01383 1024 SUPERFAMILY Cyclin-like 428 623 IPR036915 -
Chy10g01383 1024 SUPERFAMILY Cyclin-like 743 913 IPR036915 -
Chy10g01383 1024 SMART RB_A_2 420 621 IPR002720 GO:0005634|GO:0051726
Chy10g01383 1024 MobiDBLite consensus disorder prediction 392 412 - -
Chy10g01383 1024 Gene3D - 423 611 - -
Chy10g01383 1024 MobiDBLite consensus disorder prediction 887 901 - -
Chy10g01383 1024 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 28 1010 IPR028309 GO:0006357|GO:0051726
Chy10g01383 1024 Pfam Retinoblastoma-associated protein B domain 745 872 IPR002719 GO:0005634|GO:0051726
Chy10g01383 1024 Pfam Domain of unknown function (DUF3452) 98 237 IPR024599 -
Chy10g01383 1024 Coils Coil 271 295 - -
Chy10g01383 1024 Pfam Retinoblastoma-associated protein A domain 420 621 IPR002720 GO:0005634|GO:0051726
Chy10g01383 1024 Gene3D - 705 912 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18650 PF01858 RB_A 1.80E-63 CL0065 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g01383 K04681 - csv:101219810 2003.41