Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00012 | ATGATCCATTCTTCCTTGTTTGCAGCTTTTGCAGCCTCGGAAGCCATGCCTCATTCTAAAGGAGATACTCCCATGTTTTCAATGTTCTGTAGATGGAACCCCTTAAGATTGATCATTCAGGGGCTGCTATTATTCTCATTGTTGATGTTGAATTATGGGTCAACAGATCCTGATGTGGAAGGAGAAGCTTTAGTTGATTTGTTAGGGGCACTGAATGATTCCAATCATCAGATAACTGACTGGAATTACCATCTTGTAAGCCCTTGCTTTAGTTGGTCGCATATTACCTGCCGAAATGGAAATGTCATATCCTTGAGCTTGGGTTCATTAGGCTTTTCAGGATCTCTTTCTCCCTCAATTACCAAACTGAAGTATTTGGCCAGCCTGGATTTGCAGAACAATAATATAGCTGGTGTTCTACCAGATTATCTAGCTAACATGACCCACCTACAGAATTTGAATCTTGCTAATAATAACTTCAATGGGCCTATACCTGTGGCTTGGGGTCGACTTGTCGGACTAAAGCATCTGGATCTCTCAGATAACAATTTAACAGGAGAAGTTCAAGCGCAGTTCTTTTCAATTCCAATGTTCAACTTTTCAGGAACTGGTTTACCTTGTGGATTTAGGTTGGATAAACCTTGTGTTTCGACATCTCCCCATCGAGCTTCTGCTAAGAATTACAAGTTTGGGGTAGTGGCAAGTACTGCAAGTTGTGGAGGTTTCATACTTCTGTCGATTGGTGCCTTCTTTGCTTATAGATGCTTCTACATGCATAAGCTTAAGGATTCTATATTTGTTGATGTTGCTGATGAAGATGAATGTAAACTTTGCTTTGGGCAAATCAGAAGATTTTCATTGCGGGAAATCCAACTTGCTACCGCTAACTTTAATGAAGAGAACATCATTGGCCAAGGAGGCTTTGGAAAAGTATATAAAGGCATCCTCTCAGATGCCTCCAAGGTGGCTGTGAAACGGTTAACAGACTACAATAGTCCTGGCGGGAAGGCTGCATTCCTAGGAGAAGTTGAACTAATAAGCGTTGCGGTGCATAGAAATCTCCTACGTTTGATCGGGTTTTGCATAACCACATCTGAGAGAATCCTTGTTTATCCATTCATGCAGAATCTTAGTGTGGCACATCACTTGAGAGATTTAAAACCTGGAGAAAGAAGCTTGGAATGGGCCACAAGGAAACGAATTGCTTTTGGGGCAGCTCATGGTTTGGAGTATTTGCACGAGCACTGTAGTCCTAAGATCATTCATCGCGATCTGAAGGCTGCAAATATCTTACTAGATGATGACTTTGAAGCTGTTCTTGGAGATTTTGGGCTGGCTAAGCTAGTTGATACTAAAGTGACTCATATTACCACTCAAGTGCGTGGTACGATGGGTCACATTGCCCCAGAATATCTGTCCACTGGAAAGTCATCTGAAAAGACAGATGTTTTTGGATATGGTATCACCCTTCTTGAACTTGTTACTGGCCAGCGAGCAATAGATTTCTCCCGTCTCGAAGAGGAGGAAGATGTTCTTCTACTTGATCATATAAAGAAGCTGCAGAGGGAGAATAGGCTTGAAGATGTGGTGGACAAGAACTTAAAGAGCTATAACGAGAAAGAAGTCGAAAACATAGTTCAGGTGGCACTGCTTTGCACTCAAAGTTCACCGGAGGACCGGCCGACAATGGCTGAAGTTGTGAATCTGTTACATGGAGAAGGACTGGCAGATAGGTGGGCAGAGTGGATGCAGCTTGAAGAGGTAAGAGATCAGGAAGTGTCCCTCTTGTGTCACCAATTTGTTTGGGGTGAGGAATCAAGTCATGATCAAGAAGCCATACAATTGTCTAAAGCCAGATAG | 1860 | 42.58 | MIHSSLFAAFAASEAMPHSKGDTPMFSMFCRWNPLRLIIQGLLLFSLLMLNYGSTDPDVEGEALVDLLGALNDSNHQITDWNYHLVSPCFSWSHITCRNGNVISLSLGSLGFSGSLSPSITKLKYLASLDLQNNNIAGVLPDYLANMTHLQNLNLANNNFNGPIPVAWGRLVGLKHLDLSDNNLTGEVQAQFFSIPMFNFSGTGLPCGFRLDKPCVSTSPHRASAKNYKFGVVASTASCGGFILLSIGAFFAYRCFYMHKLKDSIFVDVADEDECKLCFGQIRRFSLREIQLATANFNEENIIGQGGFGKVYKGILSDASKVAVKRLTDYNSPGGKAAFLGEVELISVAVHRNLLRLIGFCITTSERILVYPFMQNLSVAHHLRDLKPGERSLEWATRKRIAFGAAHGLEYLHEHCSPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTKVTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLEDVVDKNLKSYNEKEVENIVQVALLCTQSSPEDRPTMAEVVNLLHGEGLADRWAEWMQLEEVRDQEVSLLCHQFVWGEESSHDQEAIQLSKAR* | 620 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 184979 | 191071 | - | Chy11G185920.1 | Chy11g00012 | 235773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00012 | 619 | Pfam | Leucine rich repeat | 126 | 184 | IPR001611 | GO:0005515 | |
Chy11g00012 | 619 | PANTHER | LRR RECEPTOR-LIKE KINASE | 45 | 619 | - | - | |
Chy11g00012 | 619 | SUPERFAMILY | L domain-like | 61 | 195 | - | - | |
Chy11g00012 | 619 | Gene3D | Ribonuclease Inhibitor | 57 | 215 | IPR032675 | - | |
Chy11g00012 | 619 | Pfam | Leucine rich repeat N-terminal domain | 59 | 97 | IPR013210 | - | |
Chy11g00012 | 619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 374 | 590 | - | - | |
Chy11g00012 | 619 | ProSiteProfiles | Protein kinase domain profile. | 297 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00012 | 619 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 45 | 619 | - | - | |
Chy11g00012 | 619 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 570 | IPR011009 | - | |
Chy11g00012 | 619 | ProSitePatterns | Protein kinases ATP-binding region signature. | 303 | 325 | IPR017441 | GO:0005524 | |
Chy11g00012 | 619 | Pfam | Protein kinase domain | 297 | 568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00012 | 619 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 373 | - | - | |
Chy11g00012 | 619 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 420 | 432 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g00012 | 619 | SMART | serkin_6 | 297 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g01341 | Chy-Chr7:18057291 | Chy11g00012 | Chy-Chr11:184979 | 0 | dispersed | |
Chy07g01343 | Chy-Chr7:18069032 | Chy11g00012 | Chy-Chr11:184979 | 0 | dispersed | |
Chy11g00012 | Chy-Chr11:184979 | Chy07g01304 | Chy-Chr7:17710286 | 1.10E-169 | dispersed | |
Chy11g00012 | Chy-Chr11:184979 | Chy10g01091 | Chy-Chr10:15982725 | 3.60E-163 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71526 | PF00069 | Pkinase | 2.00E-44 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00012 | - | - | csv:101206877 | 1186.02 |