Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy11g00028 | ATGGCAGTGGACGAAGAATCTCCATTGAAGCTCTACTCATTCTGGGCCAGCACTTGTGCCCAACGTGTTCGAATTGCCCTCAACCTAAAAGGACTAAACTTTCAGTACAAAGCTGTTGATATTTTGAAGGGAGAGCATTTGGCTCCTGAATATCTAAAGCTCAATCCTGTTGGTTTTGTACCTACTCTTGTGGATGGAGATGTTGTTATTGCTGACTCTTTTGCTATAATAATGTATTTGGAGGAAAAGTATCCTGAGCGTCCTTTGCTGCCTACTGATCTGGTTAAAAGGGCAATTAATCACCAGGTTGCAAATATTGTTTCTTCAAGCATACAGCCTCTTCAAAATTTAATTGTTGAGAAATACATTGAGGAAAAATGTGGTACTGAGGAGAAACTTTCTTGGGTTCACATGATCATTGGAAAAGGTTTTTTAGCACTAGAAAAGTTGCTAACAGTTGAAGCTGGAAATTTTGCTACTGGAGATCAAATTTATCTGGCAGACTTGTTTTTGGCACCTCAACTTCATCGGGCCATTGAAACATTCAATCTTGACATGTCCAAGTTTCCAATTCTATCAAGGTTGTACGAAGAATACAAGAAGATAGCAGCATTTCAAGATGCAGCACCAGAAAACCAACCCGATGCTCCCTCTCAAAACTGA | 663 | 39.82 | MAVDEESPLKLYSFWASTCAQRVRIALNLKGLNFQYKAVDILKGEHLAPEYLKLNPVGFVPTLVDGDVVIADSFAIIMYLEEKYPERPLLPTDLVKRAINHQVANIVSSSIQPLQNLIVEKYIEEKCGTEEKLSWVHMIIGKGFLALEKLLTVEAGNFATGDQIYLADLFLAPQLHRAIETFNLDMSKFPILSRLYEEYKKIAAFQDAAPENQPDAPSQN* | 221 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 374576 | 376856 | + | Chy11G186080.1 | Chy11g00028 | 235789 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy11g00028 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 11 | 88 | IPR004045 | - | |
| Chy11g00028 | 220 | SUPERFAMILY | GST C-terminal domain-like | 88 | 217 | IPR036282 | - | |
| Chy11g00028 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 93 | 218 | IPR010987 | - | |
| Chy11g00028 | 220 | CDD | GST_N_Zeta | 9 | 81 | IPR034333 | - | |
| Chy11g00028 | 220 | SFLD | Glutathione Transferase (cytosolic) | 9 | 200 | IPR040079 | - | |
| Chy11g00028 | 220 | Gene3D | - | 93 | 219 | - | - | |
| Chy11g00028 | 220 | PANTHER | MALEYLACETOACETATE ISOMERASE | 7 | 216 | - | - | |
| Chy11g00028 | 220 | SFLD | Main (cytGST) | 9 | 200 | - | - | |
| Chy11g00028 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 7 | 216 | - | - | |
| Chy11g00028 | 220 | CDD | GST_C_Zeta | 94 | 213 | IPR034330 | - | |
| Chy11g00028 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 7 | 88 | IPR004045 | - | |
| Chy11g00028 | 220 | SUPERFAMILY | Thioredoxin-like | 7 | 91 | IPR036249 | - | |
| Chy11g00028 | 220 | TIGRFAM | maiA: maleylacetoacetate isomerase | 10 | 216 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
| Chy11g00028 | 220 | Gene3D | Glutaredoxin | 7 | 92 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g00242 | Chy-Chr6:1613829 | Chy11g00028 | Chy-Chr11:374576 | 8.22E-60 | dispersed | |
| Chy07g01212 | Chy-Chr7:16934657 | Chy11g00028 | Chy-Chr11:374576 | 1.11E-11 | dispersed | |
| Chy11g00028 | Chy-Chr11:374576 | Chy06g00409 | Chy-Chr6:2761728 | 1.22E-14 | dispersed | |
| Chy11g00028 | Chy-Chr11:374576 | Chy11g00032 | Chy-Chr11:393175 | 7.41E-97 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy11g00028 | K01800 | - | csv:116401624 | 437.573 |