Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00032 ATGCAAGTTACTCATCTACAAACACAAAAGAATCACAAACTTACACTTAGTCTAAATTACGAGTACAAGGCTGTTAATCTACTCAAGGGAGAGCAATTCTCTCCTGAGTATGAGAAGCTTAATCCTATTGGTTATGTACCCACTCTTGTGGATGGTGATGTTGTTATTGCTGACTCTTTTGCTATAATCATGTATTTGGAGGAGAAGTACCCTCAGAATCCACTGTTGCCTCGTGATCTTGGTAAAAGAGCTATTAATTACCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGCAGAAAAACTTCGTTGGGTTCAACATAATATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAACCTCATGCTGGGAAATATGCTACTGGAGATGAAATCTATATGGCGGACTTGTTCCTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAATATTGACATGTCCAAATTTTCTGTATTAAACAGGTTGAATGAGGAATACAATGGTACAGCAGCCTTTCAAGATGCAGCCCCAGCGGTGCAGCCTGATGCTACTCCAACCTCTACTTAG 624 39.9 MQVTHLQTQKNHKLTLSLNYEYKAVNLLKGEQFSPEYEKLNPIGYVPTLVDGDVVIADSFAIIMYLEEKYPQNPLLPRDLGKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPAEKLRWVQHNIEKGFTALEKLLKPHAGKYATGDEIYMADLFLAPQIHGAINRFNIDMSKFSVLNRLNEEYNGTAAFQDAAPAVQPDATPTST* 208
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 393175 397943 + Chy11G186120.1 Chy11g00032 235793
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00032 207 Gene3D - 78 205 - -
Chy11g00032 207 PANTHER MALEYLACETOACETATE ISOMERASE 17 202 - -
Chy11g00032 207 Gene3D Glutaredoxin 13 77 - -
Chy11g00032 207 SFLD Glutathione Transferase (cytosolic) 16 176 IPR040079 -
Chy11g00032 207 Pfam Glutathione S-transferase, C-terminal domain 108 171 IPR004046 -
Chy11g00032 207 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 74 IPR004045 -
Chy11g00032 207 TIGRFAM maiA: maleylacetoacetate isomerase 17 202 IPR005955 GO:0003824|GO:0005737|GO:0009072
Chy11g00032 207 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 79 205 IPR010987 -
Chy11g00032 207 SFLD Main (cytGST) 16 176 - -
Chy11g00032 207 Pfam Glutathione S-transferase, N-terminal domain 18 74 IPR004045 -
Chy11g00032 207 SUPERFAMILY Thioredoxin-like 16 78 IPR036249 -
Chy11g00032 207 CDD GST_C_Zeta 82 199 IPR034330 -
Chy11g00032 207 PANTHER S-CRYSTALLIN-RELATED 17 202 - -
Chy11g00032 207 SUPERFAMILY GST C-terminal domain-like 74 203 IPR036282 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02246 Chy-Chr2:26558448 Chy11g00032 Chy-Chr11:393175 2.09E-21 dispersed
Chy11g00032 Chy-Chr11:393175 Chy06g00409 Chy-Chr6:2761728 2.42E-07 dispersed
Chy11g00028 Chy-Chr11:374576 Chy11g00032 Chy-Chr11:393175 7.41E-97 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00032 K01800 - csv:101213302 374.785