Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy11g00032 | ATGCAAGTTACTCATCTACAAACACAAAAGAATCACAAACTTACACTTAGTCTAAATTACGAGTACAAGGCTGTTAATCTACTCAAGGGAGAGCAATTCTCTCCTGAGTATGAGAAGCTTAATCCTATTGGTTATGTACCCACTCTTGTGGATGGTGATGTTGTTATTGCTGACTCTTTTGCTATAATCATGTATTTGGAGGAGAAGTACCCTCAGAATCCACTGTTGCCTCGTGATCTTGGTAAAAGAGCTATTAATTACCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGCAGAAAAACTTCGTTGGGTTCAACATAATATTGAAAAAGGTTTTACAGCACTTGAAAAGCTGCTAAAACCTCATGCTGGGAAATATGCTACTGGAGATGAAATCTATATGGCGGACTTGTTCCTGGCTCCTCAAATTCATGGCGCCATCAATAGATTCAATATTGACATGTCCAAATTTTCTGTATTAAACAGGTTGAATGAGGAATACAATGGTACAGCAGCCTTTCAAGATGCAGCCCCAGCGGTGCAGCCTGATGCTACTCCAACCTCTACTTAG | 624 | 39.9 | MQVTHLQTQKNHKLTLSLNYEYKAVNLLKGEQFSPEYEKLNPIGYVPTLVDGDVVIADSFAIIMYLEEKYPQNPLLPRDLGKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPAEKLRWVQHNIEKGFTALEKLLKPHAGKYATGDEIYMADLFLAPQIHGAINRFNIDMSKFSVLNRLNEEYNGTAAFQDAAPAVQPDATPTST* | 208 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 393175 | 397943 | + | Chy11G186120.1 | Chy11g00032 | 235793 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy11g00032 | 207 | Gene3D | - | 78 | 205 | - | - | |
| Chy11g00032 | 207 | PANTHER | MALEYLACETOACETATE ISOMERASE | 17 | 202 | - | - | |
| Chy11g00032 | 207 | Gene3D | Glutaredoxin | 13 | 77 | - | - | |
| Chy11g00032 | 207 | SFLD | Glutathione Transferase (cytosolic) | 16 | 176 | IPR040079 | - | |
| Chy11g00032 | 207 | Pfam | Glutathione S-transferase, C-terminal domain | 108 | 171 | IPR004046 | - | |
| Chy11g00032 | 207 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 18 | 74 | IPR004045 | - | |
| Chy11g00032 | 207 | TIGRFAM | maiA: maleylacetoacetate isomerase | 17 | 202 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
| Chy11g00032 | 207 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 79 | 205 | IPR010987 | - | |
| Chy11g00032 | 207 | SFLD | Main (cytGST) | 16 | 176 | - | - | |
| Chy11g00032 | 207 | Pfam | Glutathione S-transferase, N-terminal domain | 18 | 74 | IPR004045 | - | |
| Chy11g00032 | 207 | SUPERFAMILY | Thioredoxin-like | 16 | 78 | IPR036249 | - | |
| Chy11g00032 | 207 | CDD | GST_C_Zeta | 82 | 199 | IPR034330 | - | |
| Chy11g00032 | 207 | PANTHER | S-CRYSTALLIN-RELATED | 17 | 202 | - | - | |
| Chy11g00032 | 207 | SUPERFAMILY | GST C-terminal domain-like | 74 | 203 | IPR036282 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g02246 | Chy-Chr2:26558448 | Chy11g00032 | Chy-Chr11:393175 | 2.09E-21 | dispersed | |
| Chy11g00032 | Chy-Chr11:393175 | Chy06g00409 | Chy-Chr6:2761728 | 2.42E-07 | dispersed | |
| Chy11g00028 | Chy-Chr11:374576 | Chy11g00032 | Chy-Chr11:393175 | 7.41E-97 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy11g00032 | K01800 | - | csv:101213302 | 374.785 |