Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00045 ATGGATGGACAAGCTTCGATATCCAATGGCACAGATGATACGATTGTCTGCTATGCGCCGACGATGATTACGACAAATGGGGTGTGGCAAGGTGACAACCCTTTGGATTATTCTCTCCCCCTCTTCATCTTGCAGTTAACAATGGTGGTTGTGATGACTCGCATTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGGGTGGAGTGATTTTGGGGCCTTCGGTACTAGGGAGGAGTTCTAAATTTGCCAACACGGTATTTCCTCTAAGAAGTGTAATGGTGCTTGAGACAATGGCCAATGTGGGGCTTCTCTACTTTCTGTTCTTGGTTGGTGTTGAAATGGATCTCTCAGTGATTCGTCGAACAGGGAAGAAGGCAATGGCAATAGCTGTAGCAGGAATGATTCTTCCATTCGGAATAGGAGCTGCCTTTTCATTCCAATTGCACAAAGAAAGCCAAAAATTGAACTACAACACTTACGTTATGTTTCTTGGTATTGCGCTCTCTGTGACTGCTTTCCCAGTGCTAGCTAGAATTCTTGCAGAGCTTAAACTTATAAATTCAGAGCTGGGAAGGATTGCTATGGCATCTGCACTTTTCAACGATATGTGTGCTTGGGTTCTCTTAGCTTTAGCCATAGCCTTATCTGAGAATGATTCCGCATCTTTGGCTTCATTATGGGTTGTACTGTCAAGTGCAGGCTTTGTTTTGTTTTGCATTTTCATCGTTAGACCGATGATCTCATGGATGATTCGAAAAACTCCAGAAGGGGAAACTGTGAGTGAGTTCTACATATGTTTGATTCTGACAGGAGTTATGATCTCAGGATTTGTTACAGATGCCATAGGAACACACTCCGTTTTTGGGGCTTTTGTGTTTGGTTTGGTTATCCCAAATGGTTCACTTGGGGTGGCTTTAATTGAGAAACTTGAGGATTTTGTTTCAGGCCTCTTGCTTCCTCTTTTCTTCGCAATAAGTGGGCTTAAGACTAATATTTCTAGCGTAGAAGGAATATTCGCTTGGATATCTATTCTATGTATCACTCTCCTTGCTTTCATTGGCAAAGTCATAGGAACTCTTCTTGCCTCCATTTGTTATCAAATGTCCTATCGTGAAGGCGTCACGTTAGGTTTGCTTATGAACACCAAAGGCCTTATTGAAATGATCATCCTCAACGTCGGAAAGGACCAGAAGGTGTTAGATGATCAAACATTCACAGTTATGGTGATTGTAGCTCTCATTATGACAGGGATAATAACACCAGTAGTTACCATAATCTATAGGCCAACAAGAAGGTTTCTACCCTATAAGAAACGAACAATCCAAGCATCAAAACCAGATTCAGAATTTAGAGTATTAGTTTGTATACACACACCTCGAAATGTGCCAACTATCATCAACCTCCTTGATGCTTCCCATCCAACTAAAAGATCCCCAATTTGCATTTACGTGCTACACTTGGTTGAACTCACAGGTCGAGCCTCCGCCATGCTCATTGTCCACAACACCAGAAAATCAGGCCGCCCTGCATTAAATCGAACACAAGCTCAATCAGATCACATCATTAATGCATTCGAGAACTATGAACAACACGTCGATTGCGTCTCTGTTCAACCTCTCACCGCCATTTCCCCTTACTCCACAATGCACGAAGACATCTGCAATTTAGCTGAAGATAAACGAGTTGCGTTCATAATCATCCCATTCCATAAACAACAAACGGTGGATGGAGGAATGGAAGCTTCAAATCCAGCATTTAGATTGGTAAACCAAAATGTATTAGCTAATGCCCCTTGCTCCGTCGGAATTCTAGTCGATCGAGGCTTAAACGGCGCGAATCGAGTCGCATCAAACAAAGGAACTCATTATAACATAATCGTGTTTTTCTTTGGTGGACAAGATGATAGAGAAGCCCTATCATACGCATGGAGAATGTCAGAACATCCAGGAGTGAATTTAACCGTAATGCGATTCATCGCCGCACAAGAAATAATGGAACCAAAACTAGAAGAAAACACATCAAGAATTTCAACCATGGAAACAGAAATGAACAGAGATAGGAAACTGGACGAAGATTATATAAGCGAATTTAGGGCAAGGAACCCAAACAGTGAGTCAATTACTTACACAGAAAAAGTGTTGAACAACGGCGAAGAGACAGTGGCGGCCATAAGATCAATGGACGATGCTCACGACCTGTTCATCGTTGGTAGAGGTGAATCTCACATATCACCCCTCACTGCCGGACTAACAGACTGGAGTGAATGTCCAGAGCTGGGAGCAATAGGCGATTTGCTAGCCTCATCGGATTTTGCGGCAACAACTTCAGTTTTGGTAGTGCAACAGTTCGGAACAGCAATGGCGGGGGAGCATGGAGAAGAAGAAGAAGTTACACCACATAATCTTGATCCAAATGATCCTTACCAAAGCTTGAGATCCACGAATTTCAGGCAACATACTCCATCGAGAACTCAAATCATTTATGATACATGA 2514 42.48 MDGQASISNGTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVMTRILVFLLKPFRQPRVISEILGGVILGPSVLGRSSKFANTVFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGKKAMAIAVAGMILPFGIGAAFSFQLHKESQKLNYNTYVMFLGIALSVTAFPVLARILAELKLINSELGRIAMASALFNDMCAWVLLALAIALSENDSASLASLWVVLSSAGFVLFCIFIVRPMISWMIRKTPEGETVSEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNISSVEGIFAWISILCITLLAFIGKVIGTLLASICYQMSYREGVTLGLLMNTKGLIEMIILNVGKDQKVLDDQTFTVMVIVALIMTGIITPVVTIIYRPTRRFLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIINLLDASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVDCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEASNPAFRLVNQNVLANAPCSVGILVDRGLNGANRVASNKGTHYNIIVFFFGGQDDREALSYAWRMSEHPGVNLTVMRFIAAQEIMEPKLEENTSRISTMETEMNRDRKLDEDYISEFRARNPNSESITYTEKVLNNGEETVAAIRSMDDAHDLFIVGRGESHISPLTAGLTDWSECPELGAIGDLLASSDFAATTSVLVVQQFGTAMAGEHGEEEEVTPHNLDPNDPYQSLRSTNFRQHTPSRTQIIYDT* 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 506131 508889 + Chy11G186250.1 Chy11g00045 235806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00045 837 MobiDBLite consensus disorder prediction 796 820 - -
Chy11g00045 837 Pfam Sodium/hydrogen exchanger family 49 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy11g00045 837 Gene3D - 41 439 IPR038770 -
Chy11g00045 837 Gene3D - 478 759 - -
Chy11g00045 837 PANTHER BNAA09G08340D PROTEIN 12 806 - -
Chy11g00045 837 PANTHER CATION/H + ANTIPORTER 12 806 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01852 Chy-Chr1:23975401 Chy11g00045 Chy-Chr11:506131 2.64E-117 dispersed
Chy04g00044 Chy-Chr4:495806 Chy11g00045 Chy-Chr11:506131 1.86E-117 dispersed
Chy06g00880 Chy-Chr6:6348128 Chy11g00045 Chy-Chr11:506131 3.14E-09 dispersed
Chy06g01265 Chy-Chr6:11612685 Chy11g00045 Chy-Chr11:506131 2.65E-135 dispersed
Chy06g01550 Chy-Chr6:17348997 Chy11g00045 Chy-Chr11:506131 9.70E-160 dispersed
Chy06g01555 Chy-Chr6:17463401 Chy11g00045 Chy-Chr11:506131 1.97E-159 dispersed
Chy07g01186 Chy-Chr7:16713602 Chy11g00045 Chy-Chr11:506131 0 dispersed
Chy07g01187 Chy-Chr7:16727132 Chy11g00045 Chy-Chr11:506131 0 dispersed
Chy08g00353 Chy-Chr8:8376333 Chy11g00045 Chy-Chr11:506131 0 dispersed
Chy08g00771 Chy-Chr8:15403796 Chy11g00045 Chy-Chr11:506131 0 dispersed
Chy10g00347 Chy-Chr10:8755665 Chy11g00045 Chy-Chr11:506131 1.47E-173 dispersed
Chy11g01399 Chy-Chr11:20402865 Chy11g00045 Chy-Chr11:506131 1.08E-08 dispersed
Chy12g00326 Chy-Chr12:3513187 Chy11g00045 Chy-Chr11:506131 5.18E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00045 - - csv:101219265 1605.88